RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CHSY1Q86X52 802 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 LYSMD2Q8IV50 215 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ZDHHC14Q8IZN3 488 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ZCCHC9Q8N567 271 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 RFWD2Q8NHY2 731 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 GDPD5Q8WTR4 605 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 PYROXD1Q8WU10 500 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 FAM151AQ8WW52 585 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ARHGEF26Q96DR7 871 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 CEP95Q96GE4 821 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 OXNAD1Q96HP4 312 aaPredicted RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 SNX27Q96L92 541 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 PRMT6Q96LA8 375 aaPredicted RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ZMAT2Q96NC0 199 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 MTMR9Q96QG7 549 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 PANX3Q96QZ0 392 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 RBM15Q96T37 977 aaKnown RBP eCLIP7.88□□□□□ -1.152e-7■■■□□ 16.3
UBE2D3-204ENST00000349311 CGREF1Q99674 301 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 AGPAT1Q99943 283 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 SYT11Q9BT88 431 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 TSSK1BQ9BXA7 367 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 BRINP2Q9C0B6 783 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 DNAJC18Q9H819 358 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 MANSC1Q9H8J5 431 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 KIAA1586Q9HCI6 787 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 MTMR4Q9NYA4 1195 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 TMOD2Q9NZR1 351 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ZNF180Q9UJW8 692 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 RAB26Q9ULW5 256 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 STX8Q9UNK0 236 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 PLA2G4CQ9UP65 541 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 SORCS3Q9UPU3 1222 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 VWA7Q9Y334 891 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 CTDP1Q9Y5B0 961 aaPredicted RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 SMCHD1A6NHR9 2005 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 A0A0G2JND7 137 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 GOLGA8TH3BQL2 631 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 ATP2A1O14983 1001 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 DKC1O60832 514 aaKnown RBP eCLIP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 SERPINB7O75635 380 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 RAD17O75943 681 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 OR6B1O95007 311 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 CNOT4O95628 575 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 ESRRBO95718 433 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 KRT18P05783 430 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 PFKMP08237 780 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 GOLGA8HP0CJ92 632 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 SNHG28P0DPA3 235 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 CPEP16870 476 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 ZNF12P17014 697 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 COMTP21964 271 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 PAX3P23760 479 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 IVDP26440 423 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 PHBP35232 272 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 RPA3P35244 121 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 HALP42357 657 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 SLC1A1P43005 524 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 MANFP55145 182 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 RELAQ04206 551 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 MSLNQ13421 630 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 PICALMQ13492 652 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 NFYCQ13952 458 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 MAPK6Q16659 721 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 USP41Q3LFD5 358 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 NADK2Q4G0N4 442 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 SFT2D3Q587I9 215 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 HERC4Q5GLZ8 1057 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 DCAF17Q5H9S7 520 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 FAM47AQ5JRC9 791 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 TMEM63BQ5T3F8 832 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 LCE4AQ5TA78 99 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 TIGD7Q6NT04 549 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 ESPNLQ6ZVH7 1005 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 ANKS1BQ7Z6G8 1248 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 RSPH3Q86UC2 560 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 CXorf67Q86X51 503 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 TMEM126BQ8IUX1 230 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 SLC44A5Q8NCS7 719 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 OR5AN1Q8NGI8 311 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 OLIG1Q8TAK6 271 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 KRT35Q92764 455 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 CD101Q93033 1021 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 DNAJC1Q96KC8 554 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 CYTH2Q99418 400 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 TMEM47Q9BQJ4 181 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 OSBPL6Q9BZF3 934 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 WWP1Q9H0M0 922 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 THAP2Q9H0W7 228 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 CCDC68Q9H2F9 335 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 SEPT11Q9NVA2 429 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 DNAJC12Q9UKB3 198 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 CDC42EP3Q9UKI2 254 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 RABGAP1Q9Y3P9 1069 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 DTNAQ9Y4J8 743 aa7.87□□□□□ -1.15
UBE2D3-204ENST00000349311 CNTNAP1P78357 1384 aa7.86□□□□□ -1.15
UBE2D3-204ENST00000349311 NFASCO94856 1347 aa7.86□□□□□ -1.15
UBE2D3-204ENST00000349311 MYPNQ86TC9 1320 aa7.86□□□□□ -1.15
UBE2D3-204ENST00000349311 SMCO2A6NFE2 343 aa7.86□□□□□ -1.15
UBE2D3-204ENST00000349311 FOXO6A8MYZ6 492 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms