RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 TRIM32Q13049 653 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 XAF1Q6GPH4 301 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 KIAA0408Q6ZU52 694 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 IFNEQ86WN2 208 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 DHFR2Q86XF0 187 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 CADM2Q8N3J6 435 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 RAB2BQ8WUD1 216 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 SDCCAG3Q96C92 435 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 FAM96AQ9H5X1 160 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 RMND5AQ9H871 391 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 PKD2L2Q9NZM6 624 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 GPR25O00155 361 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 CHADO15335 359 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 PAPSS1O43252 624 aaPredicted RBP16.39■□□□□ 0.21
MBD1-204ENST00000347968 GRID2O43424 1007 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 POLD2P49005 469 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 CUL2Q13617 745 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 AGKQ53H12 422 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 LRRC38Q5VT99 294 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 ZNF534Q76KX8 674 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 ARMC8Q8IUR7 673 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 CCDC103Q8IW40 242 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 CMTR2Q8IYT2 770 aaKnown RBP16.39■□□□□ 0.21
MBD1-204ENST00000347968 SPATA6LQ8N4H0 392 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 ACVR1CQ8NER5 493 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 HDAC11Q96DB2 347 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 SLC45A3Q96JT2 553 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 ING2Q9H160 280 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.39■□□□□ 0.21
MBD1-204ENST00000347968 EXD2Q9NVH0 621 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 VPS28Q9UK41 221 aa16.39■□□□□ 0.21
MBD1-204ENST00000347968 CCDC78A2IDD5 438 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 TRIM64BA6NI03 449 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 HDAC3O15379 428 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 SHMT2P34897 504 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 RPS27LQ71UM5 84 aaKnown RBP16.38■□□□□ 0.21
MBD1-204ENST00000347968 ERMP1Q7Z2K6 904 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 CCNYL1Q8N7R7 359 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
MBD1-204ENST00000347968 IMPG2Q9BZV3 1241 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 PRDM8Q9NQV8 689 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 SNX15Q9NRS6 342 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 TMEM9Q9P0T7 183 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 DCDC2Q9UHG0 476 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 SYNPO2Q9UMS6 1093 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 CDYLQ9Y232 598 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 SPEF1Q9Y4P9 236 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 EIF2S1P05198 315 aaKnown RBP16.38■□□□□ 0.21
MBD1-204ENST00000347968 MIPP30301 263 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 CASP3P42574 277 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 P2RX3P56373 397 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 VAC14Q08AM6 782 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 PIGHQ14442 188 aaPredicted RBP16.38■□□□□ 0.21
MBD1-204ENST00000347968 GEN1Q17RS7 908 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 ZBTB41Q5SVQ8 909 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 ZNF677Q86XU0 584 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 LRRC49Q8IUZ0 686 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 TERB1Q8NA31 727 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
MBD1-204ENST00000347968 MAGED1Q9Y5V3 778 aaPredicted RBP16.38■□□□□ 0.21
MBD1-204ENST00000347968 TCRBV3S1A0A5B6 114 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 PTGES3LE9PB15 166 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 RFPL2O75678 378 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 INMTO95050 263 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 MBL2P11226 248 aaPredicted RBP16.37■□□□□ 0.21
MBD1-204ENST00000347968 NOVP48745 357 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SERPINB9P50453 376 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 VBP1P61758 197 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 STYK1Q6J9G0 422 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 OTOP3Q7RTS5 596 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 DDIASQ8IXT1 998 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 MFSD4AQ8N468 514 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 CELF2-AS1Q8N7Q2 184 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 ANKFN1Q8N957 763 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 ATL1Q8WXF7 558 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SEPT8Q92599 483 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 VPS33AQ96AX1 596 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 MAP6Q96JE9 813 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 CHID1Q9BWS9 393 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 TBX20Q9UMR3 447 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 PCNTO95613 3336 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 G3V2L1 256 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 GRAP2O75791 330 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SEC14L2O76054 403 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 ALDH1A2O94788 518 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 KRT8P05787 483 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 FSHRP23945 695 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 GRSF1Q12849 480 aaKnown RBP eCLIP16.37■□□□□ 0.21
MBD1-204ENST00000347968 CYBRD1Q53TN4 286 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 DACT2Q5SW24 774 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 DESI1Q6ICB0 168 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 ZCCHC8Q6NZY4 707 aaKnown RBP16.37■□□□□ 0.21
MBD1-204ENST00000347968 SCML4Q8N228 414 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 ASCC1Q8N9N2 400 aaKnown RBP16.37■□□□□ 0.21
MBD1-204ENST00000347968 SHCBP1Q8NEM2 672 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 GLMNQ92990 594 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 MED30Q96HR3 178 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 BBS2Q9BXC9 721 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 WDR12Q9GZL7 423 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms