RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SLCO1B7G3V0H7 640 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 UBDO15205 165 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 SYNCRIPO60506 623 aaKnown RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 ATP6AP2O75787 350 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 NAB1Q13506 487 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 DGKZQ13574 1117 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 RNF19BQ6ZMZ0 732 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 FRA10AC1Q70Z53 315 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 SAPCD2Q86UD0 394 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 DDIASQ8IXT1 998 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 SP8Q8IXZ3 490 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CMTR2Q8IYT2 770 aaKnown RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 OR13F1Q8NGS4 319 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 HMGCLL1Q8TB92 370 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 SH3YL1Q96HL8 342 aaPredicted RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 LRCH3Q96II8 777 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 VPS39Q96JC1 886 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 ZNF347Q96SE7 839 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 C9orf16Q9BUW7 83 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 LHPPQ9H008 270 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 GGA3Q9NZ52 723 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 DTLQ9NZJ0 730 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 ERVK-11Q9UQG0 969 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CCDC162PA2VCL2 907 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 TNNC2P02585 160 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 OXTRP30559 389 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CAP2P40123 477 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 ADAM17P78536 824 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 ZNF846Q147U1 533 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 GRM3Q14832 879 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 SPCS2Q15005 226 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 OTUD3Q5T2D3 398 aaPredicted RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 SCUBE3Q8IX30 993 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 FSTL5Q8N475 847 aaPredicted RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 KDM1BQ8NB78 822 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 SGCDQ92629 289 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CGREF1Q99674 301 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 ING2Q9H160 280 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 PDZD7Q9H5P4 517 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CYP4F12Q9HCS2 524 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 XPR1Q9UBH6 696 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CD300AQ9UGN4 299 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 MID2Q9UJV3 735 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 ZNF229Q9UJW7 825 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CTDP1Q9Y5B0 961 aaPredicted RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 DLX3O60479 287 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 DDHD2O94830 711 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 SNRPB2P08579 225 aaKnown RBP15.49■□□□□ 0.07
LMNA-201ENST00000347559 MLNP12872 115 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 CAPGP40121 348 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 TMBIM6P55061 237 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 ANO4Q32M45 955 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 VASH1Q7L8A9 365 aaPredicted RBP15.49■□□□□ 0.07
LMNA-201ENST00000347559 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 CLEC14AQ86T13 490 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 QKIQ96PU8 341 aaKnown RBP eCLIP15.49■□□□□ 0.07
LMNA-201ENST00000347559 VRTNQ9H8Y1 702 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 NEMP2A6NFY4 417 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 CABYRO75952 493 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 SBK3P0C264 359 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 PSMA4P25789 261 aaKnown RBP15.49■□□□□ 0.07
LMNA-201ENST00000347559 PPIL2Q13356 520 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 VPS72Q15906 364 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 INTS11Q5TA45 600 aaKnown RBP15.49■□□□□ 0.07
LMNA-201ENST00000347559 PYROXD2Q8N2H3 581 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 HDAC10Q969S8 669 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 NRBF2Q96F24 287 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 PRMT6Q96LA8 375 aaPredicted RBP15.49■□□□□ 0.07
LMNA-201ENST00000347559 ZNF670Q9BS34 389 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 MRPL46Q9H2W6 279 aaKnown RBP15.49■□□□□ 0.07
LMNA-201ENST00000347559 KLQ9UEF7 1012 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 ADAM28Q9UKQ2 775 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 SNX9Q9Y5X1 595 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 TLL2Q9Y6L7 1015 aa15.49■□□□□ 0.07
LMNA-201ENST00000347559 TRPC5OSA6NMA1 111 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 NRP2O60462 931 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 TPH1P17752 444 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 NAMPTP43490 491 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 PRKAA2P54646 552 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 TSPY1Q01534 308 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 SELENBP1Q13228 472 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 MAPRE2Q15555 327 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 INAVAQ3KP66 663 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 PID1Q7Z2X4 250 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 FAM35AQ86V20 835 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 CLIP4Q8N3C7 705 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 NOL6Q9H6R4 1146 aaKnown RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 HMG20AQ9NP66 347 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 PXMP2Q9NR77 195 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 CCM2LQ9NUG4 571 aaPredicted RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 SMPD3Q9NY59 655 aaPredicted RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 PTPRFP10586 1907 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 JRKO75564 520 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 HSPA1AP0DMV8 641 aaKnown RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 HSPA1BP0DMV9 641 aaKnown RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 NEK2P51955 445 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 AP3M2P53677 418 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms