RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 IMPAD1Q9NX62 359 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 TOPAZ1Q8N9V7 1692 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 WDR4P57081 412 aaKnown RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 BEX3Q00994 111 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 BNIP3Q12983 259 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 CDH18Q13634 790 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 ZNF829Q3KNS6 432 aaPredicted RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 CRTC3Q6UUV7 619 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 TMEM169Q96HH4 297 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 THUMPD3Q9BV44 507 aaKnown RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 C12orf65Q9H3J6 166 aaKnown RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 ACSS3Q9H6R3 686 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 ZNF556Q9HAH1 456 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 TBC1D13Q9NVG8 400 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 PCDHB8Q9UN66 801 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 CCDC182A6NF36 153 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 BTN3A3O00478 584 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 CRTAMO95727 393 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 MPOP05164 745 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 RENBPP51606 427 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 SPIRE1Q08AE8 756 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 ZNF280DQ6N043 979 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 LZTR1Q8N653 840 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 SNX31Q8N9S9 440 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 ANKRD52Q8NB46 1076 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 CPNE1Q99829 537 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 TKTL2Q9H0I9 626 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 FANCEQ9HB96 536 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 CRLS1Q9UJA2 301 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 PCDHA2Q9Y5H9 948 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 H0YGN5 161 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 CCNT2O60583 730 aaKnown RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 DBTP11182 482 aaKnown RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 NR4A1P22736 598 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 BDNFP23560 247 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 LRPAP1P30533 357 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 FSCN1Q16658 493 aaKnown RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 SGO1Q5FBB7 561 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 MTX3Q5HYI7 312 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 USP50Q70EL3 339 aaPredicted RBP15.64■□□□□ 0.09
SRPK1-201ENST00000346162 TCF12Q99081 682 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 VAT1Q99536 393 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 ATXN3LQ9H3M9 355 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 PDGFCQ9NRA1 345 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 NFS1Q9Y697 457 aa15.64■□□□□ 0.09
SRPK1-201ENST00000346162 LOC100506127A0A0U1RQW1 187 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 B4GALT4O60513 344 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 ZNF24P17028 368 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 OXCT1P55809 520 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 BNC1Q01954 994 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 ARHGEF7Q14155 803 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 FASTKQ14296 549 aaKnown RBP15.63■□□□□ 0.09
SRPK1-201ENST00000346162 NIPAL1Q6NVV3 410 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 DAW1Q8N136 415 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 SH3KBP1Q96B97 665 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 RCN3Q96D15 328 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 IRF2BPLQ9H1B7 796 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 PRR23AA6NEV1 266 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 VPS26AO75436 327 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 NPR3P17342 541 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 DENND5AQ6IQ26 1287 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 NSMCE2Q96MF7 247 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 ELOVL4Q9GZR5 314 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 RNF112Q9ULX5 631 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 TRIM38O00635 465 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 ATP6V1E1P36543 226 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 GPR20Q99678 358 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 APBA2Q99767 749 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 ZNF670Q9BS34 389 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 EPB41L1Q9H4G0 881 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 NOL11Q9H8H0 719 aaKnown RBP15.63■□□□□ 0.09
SRPK1-201ENST00000346162 SH3PXD2BA1X283 911 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 H7C4K7 107 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 TGDSO95455 350 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 PSMB4P28070 264 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 CRADDP78560 199 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 ZNF423Q2M1K9 1284 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 ZDHHC13Q8IUH4 622 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 TMEM86AQ8N2M4 240 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 GALNT6Q8NCL4 622 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 MCFD2Q8NI22 146 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 LRRC20Q8TCA0 184 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 WRAP73Q9P2S5 460 aaPredicted RBP15.63■□□□□ 0.09
SRPK1-201ENST00000346162 GNPTGQ9UJJ9 305 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 NOCTQ9UK39 431 aaKnown RBP15.63■□□□□ 0.09
SRPK1-201ENST00000346162 POMPQ9Y244 141 aa15.63■□□□□ 0.09
SRPK1-201ENST00000346162 FAM20BO75063 409 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 GLP2RO95838 553 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 ATXN8OSP0DMR3 200 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 PSME3P61289 254 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 RALGPS1Q5JS13 557 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 PARP8Q8N3A8 854 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 PLEKHO2Q8TD55 490 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 LHX5Q9H2C1 402 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 FBXO44Q9H4M3 255 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 XPNPEP1Q9NQW7 623 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 DYRK4Q9NR20 520 aa15.62■□□□□ 0.09
SRPK1-201ENST00000346162 CCDC59Q9P031 241 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms