RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 KCNT2Q6UVM3 1135 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 RAVER1Q8IY67 606 aaKnown RBP18.71■□□□□ 0.59
SMPD1-201ENST00000342245 SIMC1Q8NDZ2 872 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 AGR3Q8TD06 166 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 ZFP90Q8TF47 636 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 GMCL1Q96IK5 515 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 NGLY1Q96IV0 654 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 CPXM1Q96SM3 734 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 DHRS9Q9BPW9 319 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 NTPCRQ9BSD7 190 aaKnown RBP18.71■□□□□ 0.59
SMPD1-201ENST00000342245 FUNDC2Q9BWH2 189 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 NMRAL1Q9HBL8 299 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 WARS2Q9UGM6 360 aaKnown RBP18.71■□□□□ 0.59
SMPD1-201ENST00000342245 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 USP18Q9UMW8 372 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 GABBR2O75899 941 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 VNN1O95497 513 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 BMP1P13497 986 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 RBL1P28749 1068 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 SPRP35270 261 aaPredicted RBP18.71■□□□□ 0.58
SMPD1-201ENST00000342245 ETFBP38117 255 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 NPTX2P47972 431 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 CLK3P49761 638 aaKnown RBP18.71■□□□□ 0.58
SMPD1-201ENST00000342245 P2RX3P56373 397 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 GABARAPL2P60520 117 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 COPZ1P61923 177 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 FAM102BQ5T8I3 360 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 OFCC1Q8IZS5 231 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 TNS4Q8IZW8 715 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 OR6Q1Q8NGQ2 317 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 ADAM32Q8TC27 787 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 PHF10Q8WUB8 498 aaKnown RBP18.71■□□□□ 0.58
SMPD1-201ENST00000342245 ASNSD1Q9NWL6 643 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 VWA7Q9Y334 891 aa18.71■□□□□ 0.58
SMPD1-201ENST00000342245 PIGNO95427 931 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 GPIP06744 558 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 ARP10275 920 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 MIPP30301 263 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 PTPN9P43378 593 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 BNIP2Q12982 314 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 KIZQ2M2Z5 673 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 SPATS1Q496A3 300 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 TMEM198Q66K66 360 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 GET4Q7L5D6 327 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-201ENST00000342245 DDIASQ8IXT1 998 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 ROPN1LQ96C74 230 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 RMDN1Q96DB5 314 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 CEP295NLQ96MC4 621 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 RNF157Q96PX1 679 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 SLC25A23Q9BV35 468 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 FKBP14Q9NWM8 211 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 PI4KBQ9UBF8 816 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 MORF4L1Q9UBU8 362 aa18.7■□□□□ 0.58
SMPD1-201ENST00000342245 TAF4O00268 1085 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 TFE3P19532 575 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 YWHABP31946 246 aaKnown RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 CASP3P42574 277 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 VAC14Q08AM6 782 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 RALGDSQ12967 914 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 IKQ13123 557 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 AQP6Q13520 282 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 ZNF181Q2M3W8 571 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 GPAT2Q6NUI2 795 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 C8orf82Q6P1X6 216 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 PRMT9Q6P2P2 845 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 GK5Q6ZS86 529 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 CLEC14AQ86T13 490 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 GMCL1P1Q8NEA9 526 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 CDK5RAP1Q96SZ6 601 aaKnown RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 EMILIN2Q9BXX0 1053 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 MTMR12Q9C0I1 747 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 CCDC177Q9NQR7 707 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 NECTIN3Q9NQS3 549 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 INTS10Q9NVR2 710 aaKnown RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 PCSK1NQ9UHG2 260 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 FBXO9Q9UK97 447 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 OAZ3Q9UMX2 235 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 DGKBQ9Y6T7 804 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 HNRNPDLO14979 420 aaKnown RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 MTRF1O75570 445 aaKnown RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 CABYRO75952 493 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 TUFMP49411 452 aaKnown RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 NKX2-5P52952 324 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 CDH6P55285 790 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 YWHAEP62258 255 aaKnown RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 SEMA5AQ13591 1074 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 HIST2H2ACQ16777 129 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-201ENST00000342245 CYP4A22Q5TCH4 519 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 TUBA3EQ6PEY2 450 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 ZYG11AQ6WRX3 759 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 PELI3Q8N2H9 469 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 GRPEL2Q8TAA5 225 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 AURKCQ9UQB9 309 aa18.69■□□□□ 0.58
SMPD1-201ENST00000342245 APOL1O14791 398 aa18.68■□□□□ 0.58
SMPD1-201ENST00000342245 PTTG1O95997 202 aa18.68■□□□□ 0.58
SMPD1-201ENST00000342245 ALBP02768 609 aa18.68■□□□□ 0.58
SMPD1-201ENST00000342245 CHRNGP07510 517 aa18.68■□□□□ 0.58
SMPD1-201ENST00000342245 ADORA2AP29274 412 aa18.68■□□□□ 0.58
SMPD1-201ENST00000342245 LAMC2Q13753 1193 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms