RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 SMPD3Q9NY59 655 aaPredicted RBP12.64□□□□□ -0.39
SSX2IP-201ENST00000342203 SNTG2Q9NY99 539 aa12.64□□□□□ -0.39
SSX2IP-201ENST00000342203 USE1Q9NZ43 259 aa12.64□□□□□ -0.39
SSX2IP-201ENST00000342203 ADAM28Q9UKQ2 775 aa12.64□□□□□ -0.39
SSX2IP-201ENST00000342203 BAG6P46379 1132 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 RPS9P46781 194 aaKnown RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CYP4F2P78329 520 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CYP4F3Q08477 520 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 METTL6Q8TCB7 284 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 PPM1MQ96MI6 270 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CITED4Q96RK1 184 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 MARCH7Q9H992 704 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 ZNF556Q9HAH1 456 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 TPRKBQ9Y3C4 175 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 FAM32AQ9Y421 112 aaKnown RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 DUOX1Q9NRD9 1551 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 FGFR1P11362 822 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 HDCP19113 662 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 GRIK1P39086 918 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 RELL1Q8IUW5 271 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 STX19Q8N4C7 294 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 OAZ3Q9UMX2 235 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 HES2Q9Y543 173 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 HACD1B0YJ81 288 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 AKAP5P24588 427 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CDK9P50750 372 aaKnown RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 TNK2Q07912 1038 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CCDC142Q17RM4 750 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 SCARA3Q6AZY7 606 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 FSTL5Q8N475 847 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 FNDC8Q8TC99 324 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 PPP1R13LQ8WUF5 828 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 SEPT8Q92599 483 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 NUAK2Q9H093 628 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 SOX17Q9H6I2 414 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 TUBA8Q9NY65 449 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 HNRNPCL2B2RXH8 293 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 MFSD11O43934 449 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 TNFRSF21O75509 655 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CPB1P15086 417 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 IDH2P48735 452 aaKnown RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 TAF6P49848 677 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 KPNA1P52294 538 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 NRG1Q02297 640 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 ARMCX4Q5H9R4 360 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CNTD1Q8N815 330 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 ZNF540Q8NDQ6 660 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 OR9I1Q8NGQ6 314 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 MCFD2Q8NI22 146 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 ELOVL4Q9GZR5 314 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 TLE6Q9H808 572 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 PCDHGB4Q9UN71 923 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 ST14Q9Y5Y6 855 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 IGKV6D-41A0A0C4DH26 115 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 MPP1Q00013 466 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 SIM2Q14190 667 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CMPK2Q5EBM0 449 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 REP15Q6BDI9 236 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 PTRHD1Q6GMV3 140 aaKnown RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 AKAP14Q86UN6 197 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 VPS33AQ96AX1 596 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 ZMYM5Q9UJ78 669 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 TRMT6Q9UJA5 497 aaKnown RBP12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 CDC14AQ9UNH5 594 aa12.63□□□□□ -0.39
SSX2IP-201ENST00000342203 PLA2G6O60733 806 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 ATXN8OSP0DMR3 200 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 SOX6P35712 828 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 MSLNQ13421 630 aaPredicted RBP12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 VTA1Q9NP79 307 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 RNASEH2AO75792 299 aaKnown RBP12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 GUCA1CO95843 209 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 LIMK2P53671 638 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 GK3PQ14409 553 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 ZBED5Q49AG3 693 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 C1orf220Q5T0J3 134 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 LDB1Q86U70 411 aaPredicted RBP12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 HBEGFQ99075 208 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 OXCT2Q9BYC2 517 aaPredicted RBP12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 CATSPERBQ9H7T0 1116 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 ERAP1Q9NZ08 941 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 EHD3Q9NZN3 535 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 WDR37Q9Y2I8 494 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 SLC30A1Q9Y6M5 507 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■■■■ 41.7
SSX2IP-201ENST00000342203 CCNKO75909 580 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 CST1P01037 141 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 LTA4HP09960 611 aaKnown RBP12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 MTHFD1P11586 935 aaKnown RBP12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 RAD51Q06609 339 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 CDT1Q9H211 546 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 PIRTP0C851 137 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 ITGB6P18564 788 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 MERTKQ12866 999 aa12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 EFL1Q7Z2Z2 1120 aaKnown RBP12.62□□□□□ -0.39
SSX2IP-201ENST00000342203 SLC4A11Q8NBS3 891 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms