RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SPRED1Q7Z699 444 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 DENND1CQ8IV53 801 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 FAM217AQ8IXS0 508 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 AGGF1Q8N302 714 aaeCLIP11.44□□□□□ -0.58
ATXN3-201ENST00000340660 LRRC52Q8N7C0 313 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 RUFY2Q8WXA3 655 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 RUSC1Q9BVN2 902 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 NMUR1Q9HB89 426 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 RDH14Q9HBH5 336 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 TLR8Q9NR97 1041 aaKnown RBP11.44□□□□□ -0.58
ATXN3-201ENST00000340660 SEMA3GQ9NS98 782 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 SARDHQ9UL12 918 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 NTNG1Q9Y2I2 539 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 NYNRINQ9P2P1 1898 aaKnown RBP11.44□□□□□ -0.58
ATXN3-201ENST00000340660 HNRNPDLO14979 420 aaKnown RBP11.43□□□□□ -0.58
ATXN3-201ENST00000340660 HMBSP08397 361 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 TSHRP16473 764 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 CHMLP26374 656 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 ST8SIA6P61647 398 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 CREB3L3Q68CJ9 461 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 RINT1Q6NUQ1 792 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 KDELC2Q7Z4H8 507 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 IQCKQ8N0W5 287 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 PCDH19Q8TAB3 1148 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 SGPP1Q9BX95 441 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 ASPSCR1Q9BZE9 553 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 DPEP3Q9H4B8 488 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 C17orf75Q9HAS0 396 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 SLC39A1Q9NY26 324 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 APPL1Q9UKG1 709 aa11.43□□□□□ -0.58
ATXN3-201ENST00000340660 EDDM13A0A1B0GTR0 161 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 WARSP23381 471 aaKnown RBP11.42□□□□□ -0.58
ATXN3-201ENST00000340660 DNAJA1P31689 397 aaKnown RBP11.42□□□□□ -0.58
ATXN3-201ENST00000340660 CHAF1BQ13112 559 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 PDE1CQ14123 709 aaPredicted RBP11.42□□□□□ -0.58
ATXN3-201ENST00000340660 PLEKHN1Q494U1 663 aaPredicted RBP11.42□□□□□ -0.58
ATXN3-201ENST00000340660 MAP9Q49MG5 647 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 C10orf120Q5SQS8 335 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 CLEC9AQ6UXN8 241 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 HORMAD1Q86X24 394 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 CHTF18Q8WVB6 975 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 UBE2Q2Q8WVN8 375 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 BTN2A2Q8WVV5 523 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 TTC17Q96AE7 1141 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 RTP4Q96DX8 246 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 LMLNQ96KR4 655 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
ATXN3-201ENST00000340660 COMMD8Q9NX08 183 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 SIX4Q9UIU6 781 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 ZFR2Q9UPR6 939 aaKnown RBP11.42□□□□□ -0.58
ATXN3-201ENST00000340660 ZNF451Q9Y4E5 1061 aa11.42□□□□□ -0.58
ATXN3-201ENST00000340660 IGHV5-10-1A0A0J9YXX1 117 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 RAD51BO15315 384 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 PIGRP01833 764 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 PCSK6P29122 969 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 CSKP41240 450 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 SGSHP51688 502 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 YBX1P67809 324 aaKnown RBP11.41□□□□□ -0.58
ATXN3-201ENST00000340660 FOXM1Q08050 763 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 MPPE1Q53F39 396 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 CRB2Q5IJ48 1285 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 DCAF12Q5T6F0 453 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 PHACTR4Q8IZ21 702 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 EDEM1Q92611 657 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 CCDC74BQ96LY2 380 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 MRPL45Q9BRJ2 306 aaKnown RBP11.41□□□□□ -0.58
ATXN3-201ENST00000340660 NUDT22Q9BRQ3 303 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 OCIAD1Q9NX40 245 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 IPO11Q9UI26 975 aaKnown RBP11.41□□□□□ -0.58
ATXN3-201ENST00000340660 INTS6Q9UL03 887 aaKnown RBP11.41□□□□□ -0.58
ATXN3-201ENST00000340660 HS3ST3A1Q9Y663 406 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 NBEAL2Q6ZNJ1 2754 aa11.41□□□□□ -0.58
ATXN3-201ENST00000340660 ITIH6Q6UXX5 1313 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 A0A1W2PQH9 124 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 E2F3O00716 465 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 HEXAP06865 529 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 STSP08842 583 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 OR52Z1P0C646 297 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 PLS3P13797 630 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 EPHA1P21709 976 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 CD68P34810 354 aaPredicted RBP11.4□□□□□ -0.58
ATXN3-201ENST00000340660 TFAMQ00059 246 aaKnown RBP11.4□□□□□ -0.58
ATXN3-201ENST00000340660 ELAVL3Q14576 367 aaKnown RBP11.4□□□□□ -0.58
ATXN3-201ENST00000340660 DCAF10Q5QP82 559 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 SEL1L3Q68CR1 1132 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 SFR1Q86XK3 245 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 CSGALNACT2Q8N6G5 542 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 KDM1BQ8NB78 822 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 ZMIZ2Q8NF64 920 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 OR6C4Q8NGE1 309 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 DNAJB8Q8NHS0 232 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 NRGNQ92686 78 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 TBATAQ96M53 351 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 CGRRF1Q99675 332 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 DCLK3Q9C098 648 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 TMEM60Q9H2L4 133 aa11.4□□□□□ -0.58
ATXN3-201ENST00000340660 NCOA5Q9HCD5 579 aaKnown RBP11.4□□□□□ -0.58
ATXN3-201ENST00000340660 SLCO3A1Q9UIG8 710 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms