RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 GCNAQ96QF7 691 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 PANX3Q96QZ0 392 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 C17orf80Q9BSJ5 609 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 CCSER2Q9H7U1 834 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 TRNAU1APQ9NX07 287 aaKnown RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 F5H423 210 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 LPXNO60711 386 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 BAIAP3O94812 1187 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 UQCRBP14927 111 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 LAG3P18627 525 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 RCVRNP35243 200 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 SCNN1AP37088 669 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 ASPHQ12797 758 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 EFEMP1Q12805 493 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 SLC10A2Q12908 348 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 RASA2Q15283 850 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 SLC8B1Q6J4K2 584 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 HERC6Q8IVU3 1022 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 WDR83Q9BRX9 315 aaKnown RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 TUBA8Q9NY65 449 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 TEX28O15482 410 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 ENDOD1O94919 500 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 URODP06132 367 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 DLDP09622 509 aaKnown RBP15.29■□□□□ 0.04
BRAT1-201ENST00000340611 SMIM18P0DKX4 95 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 SRGAP2BP0DMP2 458 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 PEX2P28328 305 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 NEK2P51955 445 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 ARPC4P59998 168 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 KDSRQ06136 332 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 MSLNQ13421 630 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-201ENST00000340611 FBXL19Q6PCT2 694 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 FBXO36Q8NEA4 188 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 OXNAD1Q96HP4 312 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-201ENST00000340611 CSPG4P5Q96PW8 444 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 ARHGEF4Q9NR80 690 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 NDUFA13Q9P0J0 144 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 KIAA1522Q9P206 1035 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-201ENST00000340611 TCRBV7S3A2A0A539 114 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 CIB2O75838 187 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 MYCLP1P12525 358 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-201ENST00000340611 DNAJB1P25685 340 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 YWHAQP27348 245 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 ERVFC1P60507 584 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 ATP1A4Q13733 1029 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 GRAMD1BQ3KR37 738 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 BBS12Q6ZW61 710 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 PDSS2Q86YH6 399 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 UNC45BQ8IWX7 931 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 SREK1Q8WXA9 508 aaKnown RBP15.29■□□□□ 0.04
BRAT1-201ENST00000340611 IRGQQ8WZA9 623 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 C8orf48Q96LL4 319 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 WDCPQ9H6R7 721 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 TBCCD1Q9NVR7 557 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 MTO1Q9Y2Z2 717 aaKnown RBP15.29■□□□□ 0.04
BRAT1-201ENST00000340611 COQ6Q9Y2Z9 468 aa15.29■□□□□ 0.04
BRAT1-201ENST00000340611 PRRC2BQ5JSZ5 2229 aaKnown RBP15.28■□□□□ 0.04
BRAT1-201ENST00000340611 MT-ND3P03897 115 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 ADRA1BP35368 520 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 VCPP55072 806 aaKnown RBP15.28■□□□□ 0.04
BRAT1-201ENST00000340611 TAZQ16635 292 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 ARCQ7LC44 396 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 BNIPLQ7Z465 357 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 SPPL2BQ8TCT7 592 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 MZB1Q8WU39 189 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 SERAC1Q96JX3 654 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 VPS11Q9H270 941 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 ZNF395Q9H8N7 513 aaPredicted RBP15.28■□□□□ 0.04
BRAT1-201ENST00000340611 PCDHB12Q9Y5F1 795 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 NOX1Q9Y5S8 564 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 HIDE1A8MVS5 230 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 CNPP09543 421 aaKnown RBP15.28■□□□□ 0.04
BRAT1-201ENST00000340611 TGFBIQ15582 683 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 DPYSL2Q16555 572 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 ADGRD1Q6QNK2 874 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 TMC7Q7Z402 723 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 ZBTB46Q86UZ6 589 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 PALM2Q8IXS6 379 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 POU5F2Q8N7G0 328 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 FAM71DQ8N9W8 422 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 RBM15BQ8NDT2 890 aaKnown RBP15.28■□□□□ 0.04
BRAT1-201ENST00000340611 DCAKDQ8WVC6 231 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 MECRQ9BV79 373 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 CEP41Q9BYV8 373 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 PNPLA8Q9NP80 782 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 PPARGC1AQ9UBK2 798 aaKnown RBP15.28■□□□□ 0.04
BRAT1-201ENST00000340611 MARCOQ9UEW3 520 aaPredicted RBP15.28■□□□□ 0.04
BRAT1-201ENST00000340611 SHOC2Q9UQ13 582 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 N6AMT1Q9Y5N5 214 aa15.28■□□□□ 0.04
BRAT1-201ENST00000340611 SLC38A8A6NNN8 435 aa15.27■□□□□ 0.04
BRAT1-201ENST00000340611 KITP10721 976 aa15.27■□□□□ 0.04
BRAT1-201ENST00000340611 CTNNB1P35222 781 aa15.27■□□□□ 0.04
BRAT1-201ENST00000340611 EIF3EP60228 445 aaKnown RBP15.27■□□□□ 0.04
BRAT1-201ENST00000340611 GK3PQ14409 553 aa15.27■□□□□ 0.04
BRAT1-201ENST00000340611 COL13A1Q5TAT6 717 aaPredicted RBP15.27■□□□□ 0.04
BRAT1-201ENST00000340611 C6orf163Q5TEZ5 329 aa15.27■□□□□ 0.04
BRAT1-201ENST00000340611 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
BRAT1-201ENST00000340611 RNF139Q8WU17 664 aa15.27■□□□□ 0.04
BRAT1-201ENST00000340611 PRPF18Q99633 342 aaKnown RBP15.27■□□□□ 0.04
BRAT1-201ENST00000340611 TUBB6Q9BUF5 446 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms