RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZNF284Q2VY69 593 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 TMEM259Q4ZIN3 620 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 CCDC122Q5T0U0 273 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 TMCO4Q5TGY1 634 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 AFMIDQ63HM1 303 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 LAYNQ6UX15 382 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 GDPD4Q6W3E5 623 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 PARS2Q7L3T8 475 aaKnown RBP13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 VSTM4Q8IW00 320 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 TMEM145Q8NBT3 493 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 BAHD1Q8TBE0 780 aaPredicted RBP13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 KCTD15Q96SI1 283 aaPredicted RBP13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 NUP85Q9BW27 656 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 PDFQ9HBH1 243 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 UVRAGQ9P2Y5 699 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 DKK3Q9UBP4 350 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 ANAPC7Q9UJX3 599 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 NENFQ9UMX5 172 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 APOBEC2Q9Y235 224 aaKnown RBP13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 FADS3Q9Y5Q0 445 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 ACTL7AQ9Y615 435 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 SPAARA0A1B0GVQ0 90 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 UGT2B4P06133 528 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 ERCC2P18074 760 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 SERPINB6P35237 376 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 RXRGP48443 463 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 FOXC1Q12948 553 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 HADHQ16836 314 aaKnown RBP13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 KCNT1Q5JUK3 1230 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 DCP2Q8IU60 420 aaKnown RBP13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 RHBDD1Q8TEB9 315 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 ASB12Q8WXK4 309 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 CTNNBL1Q8WYA6 563 aaPredicted RBP13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 KLHDC7BQ96G42 594 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 CAMK1GQ96NX5 476 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 DEF6Q9H4E7 631 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 CWC15Q9P013 229 aaKnown RBP13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 RCOR3Q9P2K3 495 aaPredicted RBP13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 WASF3Q9UPY6 502 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 HS3ST3A1Q9Y663 406 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 TMEM131Q92545 1883 aa13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.25
SIRPB3P-201ENST00000340424 NEMP1O14524 444 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 WNT9AO14904 365 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 H2AFZP0C0S5 128 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 EIF4A3P38919 411 aaKnown RBP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 CSNK1DP48730 415 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 PAPOLAP51003 745 aaKnown RBP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 IL10RBQ08334 325 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 ATXN7L2Q5T6C5 722 aaPredicted RBP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 TMCO3Q6UWJ1 677 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 LEKR1Q6ZMV7 388 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 H2AFVQ71UI9 128 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 POLNQ7Z5Q5 900 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 ABI3BPQ7Z7G0 1075 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 CNGA4Q8IV77 575 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 DENND6BQ8NEG7 585 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 OR6K2Q8NGY2 324 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 ZNF564Q8TBZ8 553 aaPredicted RBP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 CELF6Q96J87 481 aaKnown RBP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 ZNF641Q96N77 438 aaPredicted RBP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 KLHL32Q96NJ5 620 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 ZNF599Q96NL3 588 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 LENG8Q96PV6 779 aaPredicted RBP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 TUBGCP5Q96RT8 1024 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 SLC17A9Q9BYT1 436 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 SLC39A8Q9C0K1 460 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 KLC2Q9H0B6 622 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 SP110Q9HB58 689 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 LHX3Q9UBR4 397 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 ZFR2Q9UPR6 939 aaKnown RBP13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 NEUROG3Q9Y4Z2 214 aa13.51□□□□□ -0.25
SIRPB3P-201ENST00000340424 COL5A1P20908 1838 aaPredicted RBP13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 CEP295Q9C0D2 2601 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 ACACBO00763 2458 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 A6NNZ2 444 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 RNF103O00237 685 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 AREL1O15033 823 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 SLC31A1O15431 190 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 TNFSF14O43557 240 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 AKR1B10O60218 316 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 PALMO75781 387 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 ITGAVP06756 1048 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 FTH1P19P0C7X4 201 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 RARAP10276 462 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 IL1R2P27930 398 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 EPHA8P29322 1005 aaPredicted RBP13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 RENBPP51606 427 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 FAM193AP78312 1265 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 SLC25A11Q02978 314 aaKnown RBP13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 NSUN2Q08J23 767 aaKnown RBP eCLIP13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 ELP6Q0PNE2 266 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 SGCGQ13326 291 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 CYTH1Q15438 398 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 SMTNL2Q2TAL5 461 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 ASTE1Q2TB18 679 aaPredicted RBP13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 SEL1L3Q68CR1 1132 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 BRAT1Q6PJG6 821 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms