RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 AGBL2Q5U5Z8 902 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 KIAA1958Q8N8K9 716 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 CHRAC1Q9NRG0 131 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 OBP2AQ9NY56 170 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 LHX3Q9UBR4 397 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 RPS6KL1Q9Y6S9 549 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 MAGEB16A2A368 324 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 HMGB1P1B2RPK0 211 aaPredicted RBP14.86□□□□□ -0.03
CBX3-201ENST00000337620 CDH16O75309 829 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 NFATC1O95644 943 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 CR2P20023 1033 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 CES1P23141 567 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 GCAP28676 217 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 LTBRP36941 435 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 CBX1P83916 185 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 CDK18Q07002 472 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 SLC1A5Q15758 541 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 ATXN7L2Q5T6C5 722 aaPredicted RBP14.86□□□□□ -0.03
CBX3-201ENST00000337620 TRMT10BQ6PF06 316 aaKnown RBP14.86□□□□□ -0.03
CBX3-201ENST00000337620 PGM2Q96G03 612 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 NUDCD1Q96RS6 583 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 TM6SF2Q9BZW4 377 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 PPANQ9NQ55 473 aaKnown RBP14.86□□□□□ -0.03
CBX3-201ENST00000337620 EYSQ5T1H1 3165 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 CCDC78A2IDD5 438 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 STK19P49842 368 aaPredicted RBP14.86□□□□□ -0.03
CBX3-201ENST00000337620 SLC20A2Q08357 652 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 NSUN2Q08J23 767 aaKnown RBP eCLIP14.86□□□□□ -0.03
CBX3-201ENST00000337620 CRYMQ14894 314 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 SIRPB2Q5JXA9 342 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 STEAP4Q687X5 459 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 VITQ6UXI7 678 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 CTAGE3PQ8IX95 158 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 UNC5BQ8IZJ1 945 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 ATP2A3Q93084 1043 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 ZNF669Q96BR6 464 aaPredicted RBP14.86□□□□□ -0.03
CBX3-201ENST00000337620 NSMCE3Q96MG7 304 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 SLC2A11Q9BYW1 496 aa14.86□□□□□ -0.03
CBX3-201ENST00000337620 TRIOBPQ9H2D6 2365 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 MIA3Q5JRA6 1907 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 LOC285095A0A1B0GVY8 99 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 A0A1W2PPC1 479 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 LAMP2P13473 410 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 MTHFRP42898 656 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 MSH2P43246 934 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 GYS2P54840 703 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 MAGOHP61326 146 aaKnown RBP14.85□□□□□ -0.03
CBX3-201ENST00000337620 SMAD1Q15797 465 aaKnown RBP14.85□□□□□ -0.03
CBX3-201ENST00000337620 PCID2Q5JVF3 399 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 FEM1CQ96JP0 617 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 FCRL3Q96P31 734 aaPredicted RBP14.85□□□□□ -0.03
CBX3-201ENST00000337620 PAFAH2Q99487 392 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 FAM83CQ9BQN1 747 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 POMKQ9H5K3 350 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 ARNT2Q9HBZ2 717 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 SLC24A2Q9UI40 661 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 SLC25A13Q9UJS0 675 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 SOX13Q9UN79 622 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 CHKBQ9Y259 395 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 PCDHGC4Q9Y5F7 938 aa14.85□□□□□ -0.03
CBX3-201ENST00000337620 TMEM265A0A087WTH1 108 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PRKCHP24723 683 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 DGKGP49619 791 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 ECT2LQ008S8 904 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 SEPT6Q14141 434 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 GRM2Q14416 872 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 GALNT3Q14435 633 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 TMED2Q15363 201 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 ACCSLQ4AC99 568 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 ANKRD20A4Q4UJ75 823 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 SPANXN3Q5MJ09 141 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 TMEM135Q86UB9 458 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 ADIPOR2Q86V24 386 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 MFSD6LQ8IWD5 586 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 YAF2Q8IY57 180 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 CYP4X1Q8N118 509 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 AHI1Q8N157 1196 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PPM1NQ8N819 430 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PPHLN1Q8NEY8 458 aaKnown RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 E2F7Q96AV8 911 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 MFSD3Q96ES6 412 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 MSLNLQ96KJ4 702 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 KXD1Q9BQD3 176 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PLA2G2FQ9BZM2 168 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 STMN4Q9H169 189 aaPredicted RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 TNKS2Q9H2K2 1166 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 IL1RAPL1Q9NZN1 696 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 IKBKGQ9Y6K9 419 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 FAM237BA0A1B0GVD1 139 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 OTOL1A6NHN0 477 aaPredicted RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 CXorf49A8MYA2 514 aaPredicted RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 HOXC11O43248 304 aaPredicted RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 USP1O94782 785 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 ATXN1LP0C7T5 689 aaKnown RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 SRCP12931 536 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 POLR2EP19388 210 aaKnown RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 NMBRP28336 390 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 HPDP32754 393 aaPredicted RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 SULT2A1Q06520 285 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms