RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SYTL2Q9HCH5 934 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 GPR182O15218 404 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 ERVK-10P10266 1014 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 MMRN1Q13201 1228 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 ZFP69Q49AA0 526 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 GRTP1Q5TC63 336 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 BROXQ5VW32 411 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 TAF2Q6P1X5 1199 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 FBXL19Q6PCT2 694 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 IRGQQ8WZA9 623 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 NPAS2Q99743 824 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 MRIQ9BWK5 157 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 STN1Q9H668 368 aaKnown RBP16.22■□□□□ 0.19
NPHP3-201ENST00000337331 MOV10Q9HCE1 1003 aaKnown RBP16.22■□□□□ 0.19
NPHP3-201ENST00000337331 GLP2RO95838 553 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.19
NPHP3-201ENST00000337331 ATF4P18848 351 aaPredicted RBP16.22■□□□□ 0.19
NPHP3-201ENST00000337331 YAP1P46937 504 aaKnown RBP16.22■□□□□ 0.19
NPHP3-201ENST00000337331 SLC18A1P54219 525 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 VAC14Q08AM6 782 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 FCHO2Q0JRZ9 810 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 KRR1Q13601 381 aaKnown RBP16.22■□□□□ 0.19
NPHP3-201ENST00000337331 FRMD7Q6ZUT3 714 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 SLC15A3Q8IY34 581 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 S100ZQ8WXG8 99 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 RTKNQ9BST9 563 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 C9orf16Q9BUW7 83 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 NMRAL1Q9HBL8 299 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 VAV3Q9UKW4 847 aa16.22■□□□□ 0.19
NPHP3-201ENST00000337331 NAGLUP54802 743 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 PSME3P61289 254 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 KCNJ8Q15842 424 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 ATP6AP1LQ52LC2 224 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 FNBP1LQ5T0N5 605 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 PAGE2Q7Z2X7 111 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 CBR4Q8N4T8 237 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 FANCEQ9HB96 536 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 PTPRHQ9HD43 1115 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 C12orf4Q9NQ89 552 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 ENTPD7Q9NQZ7 604 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 HSFX1Q9UBD0 423 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 SPASTQ9UBP0 616 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 MPOP05164 745 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 COL6A2P12110 1019 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 ITGAXP20702 1163 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 PRKACBP22694 351 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 TNFSF9P41273 254 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 THOP1P52888 689 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 MRPL28Q13084 256 aaKnown RBP16.21■□□□□ 0.19
NPHP3-201ENST00000337331 DDX53Q86TM3 631 aaKnown RBP16.21■□□□□ 0.19
NPHP3-201ENST00000337331 RORBQ92753 470 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 HDAC2Q92769 488 aaKnown RBP16.21■□□□□ 0.19
NPHP3-201ENST00000337331 EPB41L1Q9H4G0 881 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 TMEM134Q9H6X4 195 aa16.21■□□□□ 0.19
NPHP3-201ENST00000337331 EIF3LQ9Y262 564 aaKnown RBP16.21■□□□□ 0.19
NPHP3-201ENST00000337331 CHD2O14647 1828 aaKnown RBP16.21■□□□□ 0.18
NPHP3-201ENST00000337331 PLA2G6O60733 806 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 PTGS2P35354 604 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 UGCGQ16739 394 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 ARMC4Q5T2S8 1044 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 UGT3A1Q6NUS8 523 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 PKN3Q6P5Z2 889 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 PHF13Q86YI8 300 aaPredicted RBP16.21■□□□□ 0.18
NPHP3-201ENST00000337331 UBASH3BQ8TF42 649 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 BIRC8Q96P09 236 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 TOR3AQ9H497 397 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 TRIM45Q9H8W5 580 aaPredicted RBP16.21■□□□□ 0.18
NPHP3-201ENST00000337331 ACSS2Q9NR19 701 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 ZNF221Q9UK13 617 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 PCDHB8Q9UN66 801 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 ERVK-11Q9UQG0 969 aa16.21■□□□□ 0.18
NPHP3-201ENST00000337331 ASTN2O75129 1339 aaPredicted RBP16.21■□□□□ 0.18
NPHP3-201ENST00000337331 PIGNO95427 931 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 ASS1P00966 412 aaKnown RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 POMCP01189 267 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 IL12AP29459 219 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 ST8SIA6P61647 398 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 PRR23BQ6ZRT6 265 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 OTUB1Q96FW1 271 aaPredicted RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 ZNF696Q9H7X3 374 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 SIX2Q9NPC8 291 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 KCNH4Q9UQ05 1017 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 KANSL1LA0AUZ9 987 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 FAM25AB3EWG3 89 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 FAM25CB3EWG5 89 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 FAM25GB3EWG6 89 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 TNFRSF21O75509 655 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 NFICP08651 508 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 SERPINH1P50454 418 aaKnown RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 AARS2Q5JTZ9 985 aaKnown RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 SLC9A4Q6AI14 798 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 STK32CQ86UX6 486 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 KLHL32Q96NJ5 620 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 SSU72Q9NP77 194 aaKnown RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 CNTNAP2Q9UHC6 1331 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 BTBD3Q9Y2F9 522 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 ILVBLA1L0T0 632 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 TRIM38O00635 465 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 PTPRAP18433 802 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms