RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ZBTB6Q15916 424 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 METTL21CQ5VZV1 264 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 FNDC8Q8TC99 324 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 RABL2BQ9UNT1 228 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 MAGEB16A2A368 324 aa16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 MYBPHLA2RUH7 354 aa16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 MMP3P08254 477 aa16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 DARSP14868 501 aaKnown RBP16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 PPARGP37231 505 aaPredicted RBP16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 ADGRG6Q86SQ4 1221 aa16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 RYBPQ8N488 228 aaPredicted RBP16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 PHF21BQ96EK2 531 aa16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 HNRNPABQ99729 332 aaKnown RBP16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 MLPHQ9BV36 600 aaPredicted RBP16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 FICDQ9BVA6 458 aa16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 ADARB2Q9NS39 739 aaKnown RBP16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 NUDT5Q9UKK9 219 aa16.71■□□□□ 0.26
CDC42EP4-201ENST00000335793 MATN2O00339 956 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 DCLK1O15075 740 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 PEX1O43933 1283 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 CSPG5O95196 566 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 JUNP05412 331 aaKnown RBP16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 ENTPD1P49961 510 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 SLC12A1Q13621 1099 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 PTK2BQ14289 1009 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 KBTBD6Q86V97 674 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 LINC01465Q8N7H1 131 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 PNPLA1Q8N8W4 532 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 RP9Q8TA86 221 aaKnown RBP16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 COLEC11Q9BWP8 271 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 TRPV6Q9H1D0 765 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 ANLNQ9NQW6 1124 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 TRNAU1APQ9NX07 287 aaKnown RBP16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 CCDC167Q9P0B6 97 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 ITM2BQ9Y287 266 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 RRN3P2A6NIE6 340 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 NCAM2O15394 837 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 LRIG2O94898 1065 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 AHSGP02765 367 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 APOA4P06727 396 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 CD68P34810 354 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 SH3BGRP55822 239 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 C6orf52Q5T4I8 152 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 ESRP1Q6NXG1 681 aaKnown RBP16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 RPS27LQ71UM5 84 aaKnown RBP16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 TMEM40Q8WWA1 233 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 SENP8Q96LD8 212 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 DCUN1D5Q9BTE7 237 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 OSBPL10Q9BXB5 764 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 RHOBTB2Q9BYZ6 727 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 GBA3Q9H227 469 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 MRGBPQ9NV56 204 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 AP4B1Q9Y6B7 739 aa16.7■□□□□ 0.26
CDC42EP4-201ENST00000335793 CABYRO75952 493 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 SMIM10L2AP0DMW4 78 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 SMIM10L2BP0DMW5 78 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 TSPAN8P19075 237 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 CYP2B6P20813 491 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 FGFR3P22607 806 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 RELAQ04206 551 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 DPYSQ14117 519 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 ZNF470Q6ECI4 717 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 CYP2R1Q6VVX0 501 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 CROTQ9UKG9 612 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 FAM95CA0A1B0GW59 222 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 MTSS1O43312 755 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 NELFEP18615 380 aaKnown RBP16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 RCVRNP35243 200 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 CSE1LP55060 971 aaKnown RBP16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 PDAP1Q13442 181 aaKnown RBP16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 LPIN1Q14693 890 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 TLR1Q15399 786 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 ZNF280DQ6N043 979 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 FBXL19Q6PCT2 694 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 GK5Q6ZS86 529 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 ATPAF2Q8N5M1 289 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 TTC16Q8NEE8 873 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 PPP1R10Q96QC0 940 aaKnown RBP16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 RHOJQ9H4E5 214 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 TRPC7Q9HCX4 862 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 CASS4Q9NQ75 786 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 TRHDEQ9UKU6 1024 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 H2AFYO75367 372 aaKnown RBP16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 MYL3P08590 195 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 SCNN1AP37088 669 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 SNAPC2Q13487 334 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 MYLK3Q32MK0 819 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 IPPQ9Y573 584 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 COL1A2P08123 1366 aa16.69■□□□□ 0.26
CDC42EP4-201ENST00000335793 ADAM23O75077 832 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 TRMUO75648 421 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 MS4A2Q01362 244 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 PPIL2Q13356 520 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 GK3PQ14409 553 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 UGP2Q16851 508 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 LRRC8EQ6NSJ5 796 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 ZYG11AQ6WRX3 759 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 GPRIN1Q7Z2K8 1008 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 ZC3HC1Q86WB0 502 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 METTL25Q8N6Q8 603 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms