RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 C9orf57Q5W0N0 161 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 ITPRIPL1Q6GPH6 555 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 HFE2Q6ZVN8 426 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 SPPL2BQ8TCT7 592 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 PPP1R13LQ8WUF5 828 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 WNT8BQ93098 351 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 TOP1MTQ969P6 601 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 GPR78Q96P69 363 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 MRPL46Q9H2W6 279 aaKnown RBP23.86■■□□□ 1.41
TSKU-201ENST00000333090 MCM3APO60318 1980 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 ZNF839A8K0R7 811 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 SPNS2Q8IVW8 549 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 MFSD6LQ8IWD5 586 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 EFHD1Q9BUP0 239 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 CYP4F12Q9HCS2 524 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 GJD2Q9UKL4 321 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 FAM95CA0A1B0GW59 222 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 CLDN5O00501 218 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 UBDO15205 165 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 AKAP10O43572 662 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 JCHAINP01591 159 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 COL6A2P12110 1019 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 ADRA1BP35368 520 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 RPS27LQ71UM5 84 aaKnown RBP23.85■■□□□ 1.41
TSKU-201ENST00000333090 PIWIL4Q7Z3Z4 852 aaKnown RBP23.85■■□□□ 1.41
TSKU-201ENST00000333090 CLVS1Q8IUQ0 354 aaPredicted RBP23.85■■□□□ 1.41
TSKU-201ENST00000333090 NT5C3BQ969T7 300 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 PBXIP1Q96AQ6 731 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 PLEKHG4BQ96PX9 1271 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 SLC39A3Q9BRY0 314 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 ANKRD60Q9BZ19 345 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 OSBPL2Q9H1P3 480 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 IPO11Q9UI26 975 aaKnown RBP23.85■■□□□ 1.41
TSKU-201ENST00000333090 TDRKHQ9Y2W6 561 aaKnown RBP23.85■■□□□ 1.41
TSKU-201ENST00000333090 TCRBV3S1A0A5B6 114 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 NPHS1O60500 1241 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 ENTPD1P49961 510 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 TUBA4AP68366 448 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 MAPRE2Q15555 327 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 FBXO47Q5MNV8 452 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 CHSY3Q70JA7 882 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 ZNF554Q86TJ5 538 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 LINC01465Q8N7H1 131 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 SNX27Q96L92 541 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 BIRC8Q96P09 236 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 EBF1Q9UH73 591 aa23.85■■□□□ 1.41
TSKU-201ENST00000333090 I6L893 689 aaPredicted RBP23.84■■□□□ 1.41
TSKU-201ENST00000333090 SOCS2O14508 198 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 SPTLC1O15269 473 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 BEST1O76090 585 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 LGALS2P05162 132 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 C1QTNF8P60827 252 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 POU6F1Q14863 301 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 PITRM1Q5JRX3 1037 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 C6orf10Q5SRN2 563 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 NAPEPLDQ6IQ20 393 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 FAM110BQ8TC76 370 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 RANBP9Q96S59 729 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 DCUN1D5Q9BTE7 237 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 LRRC4Q9HBW1 653 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 DUS2Q9NX74 493 aaKnown RBP23.84■■□□□ 1.41
TSKU-201ENST00000333090 MRASO14807 208 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 TRAP1Q12931 704 aaKnown RBP23.84■■□□□ 1.41
TSKU-201ENST00000333090 C16orf72Q14CZ0 275 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 GPR141Q7Z602 305 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 HM13Q8TCT9 377 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 USP33Q8TEY7 942 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 ELMO2Q96JJ3 720 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 KIFC1Q9BW19 673 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 EIF2AQ9BY44 585 aaKnown RBP23.84■■□□□ 1.41
TSKU-201ENST00000333090 TNFRSF12AQ9NP84 129 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 GMPR2Q9P2T1 348 aaKnown RBP23.84■■□□□ 1.41
TSKU-201ENST00000333090 TRHDEQ9UKU6 1024 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 SLC8A2Q9UPR5 921 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 TLL2Q9Y6L7 1015 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 SHROOM3Q8TF72 1996 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 BRCA2P51587 3418 aa23.84■■□□□ 1.41
TSKU-201ENST00000333090 NCAM2O15394 837 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 GPC4O75487 556 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 MT-CO1P00395 513 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 ZNF286BP0CG31 522 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 SQLEQ14534 574 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 UGP2Q16851 508 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 NHSL2Q5HYW2 709 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 OTOP3Q7RTS5 596 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 OR9I1Q8NGQ6 314 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 HEXDCQ8WVB3 486 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 CANT1Q8WVQ1 401 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 PLEKHA5Q9HAU0 1116 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 SAC3D1A6NKF1 404 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 GRIA3P42263 894 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 PLOD1Q02809 727 aaPredicted RBP23.83■■□□□ 1.41
TSKU-201ENST00000333090 ZBTB6Q15916 424 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 FAM219BQ5XKK7 198 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 ZNF280DQ6N043 979 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 SIX6OS1Q8N1H7 587 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 ZNF786Q8N393 782 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 CHST12Q9NRB3 414 aa23.83■■□□□ 1.41
TSKU-201ENST00000333090 SNRPB2P08579 225 aaKnown RBP23.83■■□□□ 1.4
TSKU-201ENST00000333090 GNAO1P09471 354 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms