RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 ALG1LQ6GMV1 187 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 NCEH1Q6PIU2 408 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 SYT10Q6XYQ8 523 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 CDKL3Q8IVW4 592 aaPredicted RBP26.27■■□□□ 1.8
SMDT1-201ENST00000331479 HDDC3Q8N4P3 179 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 LRIG1Q96JA1 1093 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 C16orf45Q96MC5 204 aaPredicted RBP26.27■■□□□ 1.8
SMDT1-201ENST00000331479 SEMA3CQ99985 751 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 POLR1EQ9GZS1 481 aaKnown RBP26.27■■□□□ 1.8
SMDT1-201ENST00000331479 USP29Q9HBJ7 922 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 SCUBE2Q9NQ36 999 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 TTC7AQ9ULT0 858 aaPredicted RBP26.27■■□□□ 1.8
SMDT1-201ENST00000331479 SCML1Q9UN30 329 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 PCDHGA2Q9Y5H1 932 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 BCLAF3A2AJT9 711 aaKnown RBP26.26■■□□□ 1.79
SMDT1-201ENST00000331479 CES2O00748 559 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 LIASO43766 372 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 ZNF217O75362 1048 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 TCP1P17987 556 aaKnown RBP26.26■■□□□ 1.79
SMDT1-201ENST00000331479 DSC2Q02487 901 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 NIPAL4Q0D2K0 466 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 TTC31Q49AM3 519 aaPredicted RBP26.26■■□□□ 1.79
SMDT1-201ENST00000331479 GDPD4Q6W3E5 623 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 FAM124AQ86V42 546 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 CAMK1DQ8IU85 385 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 KLHL32Q96NJ5 620 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 NEUROG2Q9H2A3 272 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 MBD1Q9UIS9 605 aaPredicted RBP26.26■■□□□ 1.79
SMDT1-201ENST00000331479 R4GN57 208 aa26.26■■□□□ 1.79
SMDT1-201ENST00000331479 IGHV1OR15-9A0A0B4J2B8 117 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 KCNN4O15554 427 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 MTSS1O43312 755 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 RNASEH2AO75792 299 aaKnown RBP26.25■■□□□ 1.79
SMDT1-201ENST00000331479 IGLV3-19P01714 112 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 PRLRP16471 622 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 AP1S1P61966 158 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 CNTN1Q12860 1018 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 SNX1Q13596 522 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 ZNF567Q8N184 647 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 ARRDC2Q8TBH0 407 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 GANCQ8TET4 914 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 TEKT5Q96M29 485 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 OMDQ99983 421 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 OSBPL1AQ9BXW6 950 aa26.25■■□□□ 1.79
SMDT1-201ENST00000331479 OASLQ15646 514 aaKnown RBP26.24■■□□□ 1.79
SMDT1-201ENST00000331479 ZNF805Q5CZA5 627 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP26.24■■□□□ 1.79
SMDT1-201ENST00000331479 USP30Q70CQ3 517 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 ACTRT1Q8TDG2 376 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 MAIP1Q8WWC4 291 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 GAB3Q8WWW8 586 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 TUBGCP5Q96RT8 1024 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 TMEM121Q9BTD3 319 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 FRMD8P1Q9BZ68 369 aaPredicted RBP26.24■■□□□ 1.79
SMDT1-201ENST00000331479 SAR1BQ9Y6B6 198 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 ANKRD36A6QL64 1941 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 PGRMC1O00264 195 aaKnown RBP26.24■■□□□ 1.79
SMDT1-201ENST00000331479 LILRB5O75023 590 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 RPP40O75818 363 aaKnown RBP26.24■■□□□ 1.79
SMDT1-201ENST00000331479 BCKDHBP21953 392 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 ITGB7P26010 798 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 CASQ1P31415 396 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 CD68P34810 354 aaPredicted RBP26.24■■□□□ 1.79
SMDT1-201ENST00000331479 BYSLQ13895 437 aaKnown RBP26.24■■□□□ 1.79
SMDT1-201ENST00000331479 PARS2Q7L3T8 475 aaKnown RBP26.24■■□□□ 1.79
SMDT1-201ENST00000331479 PRELID2Q8N945 189 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 KCNH6Q9H252 994 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 SUV39H2Q9H5I1 410 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 ATP13A3Q9H7F0 1226 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 PCDHGC4Q9Y5F7 938 aa26.24■■□□□ 1.79
SMDT1-201ENST00000331479 PLXND1Q9Y4D7 1925 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 MMP2P08253 660 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 ACSL1P33121 698 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 MAPK8P45983 427 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 GDF10P55107 478 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 BCL2L1Q07817 233 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 GRM3Q14832 879 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 CCNG2Q16589 344 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 AGBL4Q5VU57 503 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 FAM71DQ8N9W8 422 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 NKD2Q969F2 451 aaPredicted RBP26.23■■□□□ 1.79
SMDT1-201ENST00000331479 FAM131CQ96AQ9 280 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 TOE1Q96GM8 510 aaKnown RBP26.23■■□□□ 1.79
SMDT1-201ENST00000331479 PPP1R16AQ96I34 528 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 AP1M1Q9BXS5 423 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 HAUS2Q9NVX0 235 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 KLHL8Q9P2G9 620 aaPredicted RBP26.23■■□□□ 1.79
SMDT1-201ENST00000331479 NCKAP1Q9Y2A7 1128 aa26.23■■□□□ 1.79
SMDT1-201ENST00000331479 FANCMQ8IYD8 2048 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 CACNA1HO95180 2353 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 C16orf96A6NNT2 1141 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 TRAFD1O14545 582 aaPredicted RBP26.22■■□□□ 1.79
SMDT1-201ENST00000331479 CD6P30203 668 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 PTPN5P54829 565 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 RALGPS1Q5JS13 557 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 PIP5KL1Q5T9C9 394 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 ERN2Q76MJ5 926 aaKnown RBP26.22■■□□□ 1.79
SMDT1-201ENST00000331479 PID1Q7Z2X4 250 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 KBTBD6Q86V97 674 aa26.22■■□□□ 1.79
SMDT1-201ENST00000331479 ZSWIM9Q86XI8 627 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms