RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 PAF1Q8N7H5 531 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 FAM131CQ96AQ9 280 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 ARRDC3Q96B67 414 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 HDAC11Q96DB2 347 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 TSGA13Q96PP4 275 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 TUBGCP5Q96RT8 1024 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 ATP13A3Q9H7F0 1226 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 USP34Q70CQ2 3546 aa16.71■□□□□ 0.27
TPM2-201ENST00000329305 NYNRINQ9P2P1 1898 aaKnown RBP16.7■□□□□ 0.26
TPM2-201ENST00000329305 C16orf96A6NNT2 1141 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 MATN3O15232 486 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 PEX11BO96011 259 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 KRT10P13645 584 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 ADRB3P13945 408 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 SERPINA4P29622 427 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 SCNN1BP51168 640 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 AP1S1P61966 158 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 SLC10A2Q12908 348 aaPredicted RBP16.7■□□□□ 0.26
TPM2-201ENST00000329305 CSRP2Q16527 193 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 PIP5KL1Q5T9C9 394 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 CCDC181Q5TID7 509 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 SRLQ86TD4 932 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 CCDC13Q8IYE1 715 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 C12orf50Q8NA57 414 aaPredicted RBP16.7■□□□□ 0.26
TPM2-201ENST00000329305 CEP76Q8TAP6 659 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 P3H4Q92791 437 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 FATE1Q969F0 183 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 RAB7BQ96AH8 199 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 PDLIM2Q96JY6 352 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 KLHL32Q96NJ5 620 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 BRD8Q9H0E9 1235 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 MIR1-1HGQ9H1L0 117 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 PREBQ9HCU5 417 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 PILRBQ9UKJ0 227 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
TPM2-201ENST00000329305 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.7■□□□□ 0.26
TPM2-201ENST00000329305 ATXN2Q99700 1313 aaKnown RBP16.7■□□□□ 0.26
TPM2-201ENST00000329305 DMDP11532 3685 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 INSIG1O15503 277 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 PIGNO95427 931 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 ZNF806P0C7X5 589 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 XPAP23025 273 aaPredicted RBP16.69■□□□□ 0.26
TPM2-201ENST00000329305 PEX5P50542 639 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 BCL2L1Q07817 233 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 PPIDQ08752 370 aaKnown RBP16.69■□□□□ 0.26
TPM2-201ENST00000329305 AP1B1Q10567 949 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 LLGL1Q15334 1064 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 CCDC6Q16204 474 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 RALGPS1Q5JS13 557 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 PLA2G2CQ5R387 149 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 PEAR1Q5VY43 1037 aaPredicted RBP16.69■□□□□ 0.26
TPM2-201ENST00000329305 NPNTQ6UXI9 565 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 PARS2Q7L3T8 475 aaKnown RBP16.69■□□□□ 0.26
TPM2-201ENST00000329305 DNASE2BQ8WZ79 361 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 MAML1Q92585 1016 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 BIRC7Q96CA5 298 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 ZNF641Q96N77 438 aaPredicted RBP16.69■□□□□ 0.26
TPM2-201ENST00000329305 MGME1Q9BQP7 344 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 SCUBE2Q9NQ36 999 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 AMACRQ9UHK6 382 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 EIF2B4Q9UI10 523 aaKnown RBP16.69■□□□□ 0.26
TPM2-201ENST00000329305 PACSIN2Q9UNF0 486 aaPredicted RBP16.69■□□□□ 0.26
TPM2-201ENST00000329305 EFR3BQ9Y2G0 817 aa16.69■□□□□ 0.26
TPM2-201ENST00000329305 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.68■□□□□ 0.26
TPM2-201ENST00000329305 RNF103O00237 685 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 NEMP1O14524 444 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 KHNYNO15037 678 aaKnown RBP16.68■□□□□ 0.26
TPM2-201ENST00000329305 PCDH8O95206 1070 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 CCNB1P14635 433 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 MAOBP27338 520 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 HOXD11P31277 338 aaPredicted RBP16.68■□□□□ 0.26
TPM2-201ENST00000329305 PTPN7P35236 360 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 RGRP47804 291 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 CCR5P51681 352 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 ITKQ08881 620 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 DUOXA1Q1HG43 343 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 NEK5Q6P3R8 708 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 BRAT1Q6PJG6 821 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 TTC7BQ86TV6 843 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 TEX26Q8N6G2 289 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 HCAR2Q8TDS4 363 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 ALG3Q92685 438 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 OLFM3Q96PB7 478 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 NUDCD1Q96RS6 583 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 LGMNQ99538 433 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 HEMGNQ9BXL5 484 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 NUSAP1Q9BXS6 441 aaKnown RBP16.68■□□□□ 0.26
TPM2-201ENST00000329305 OSBPL8Q9BZF1 889 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 POLR1EQ9GZS1 481 aaKnown RBP16.68■□□□□ 0.26
TPM2-201ENST00000329305 SUV39H2Q9H5I1 410 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 NT5MQ9NPB1 228 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 TMEM74BQ9NUR3 256 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 RBM22Q9NW64 420 aaKnown RBP eCLIP16.68■□□□□ 0.26
TPM2-201ENST00000329305 DKK3Q9UBP4 350 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 TTLL3Q9Y4R7 772 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 NUP205Q92621 2012 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 THADAQ6YHU6 1953 aa16.68■□□□□ 0.26
TPM2-201ENST00000329305 ABCA7Q8IZY2 2146 aa16.67■□□□□ 0.26
TPM2-201ENST00000329305 VPS13AQ96RL7 3174 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms