RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 WNT3AP56704 352 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 AUHQ13825 339 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 CYTH1Q15438 398 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 PGS1Q32NB8 556 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 FAM98BQ52LJ0 330 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 SLC22A17Q8WUG5 538 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 ELMO1Q92556 727 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 ABHD8Q96I13 439 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 RHOJQ9H4E5 214 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 PSME2Q9UL46 239 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 STYXL1Q9Y6J8 313 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 VIRMAQ69YN4 1812 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 FAM237BA0A1B0GVD1 139 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 NDUFS2O75306 463 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 RPP40O75818 363 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 OCM2P0CE71 109 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 OCMP0CE72 109 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 EPB42P16452 691 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 IL10RBQ08334 325 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 ACSM2AQ08AH3 577 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 FASTKQ14296 549 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 AGKQ53H12 422 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 ATAT1Q5SQI0 421 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 GPR158Q5T848 1215 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 ACSM2BQ68CK6 577 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 DNAAF5Q86Y56 855 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 MCRS1Q96EZ8 462 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 COPS8Q99627 209 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 SLC25A51Q9H1U9 297 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 DDX28Q9NUL7 540 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 GMIPQ9P107 970 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 CFAP97Q9P2B7 532 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 FETUBQ9UGM5 382 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 ZNF180Q9UJW8 692 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 REXO2Q9Y3B8 237 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 E9PAM4 449 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 NDST3O95803 873 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 OTCP00480 354 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 FAM153BP0C7A2 387 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 NOVP48745 357 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 FAM153CQ494X1 144 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 ARMC3Q5W041 872 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 SUSD3Q96L08 255 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 HAPLN3Q96S86 360 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 FGFBP2Q9BYJ0 223 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 GDAP2Q9NXN4 497 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 ZNF229Q9UJW7 825 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 C2CD4BA6NLJ0 364 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 CLDN5O00501 218 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 DEAF1O75398 565 aaPredicted RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 DGKIO75912 1065 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 TRPC1P48995 793 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 CLCNKBP51801 687 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 CDC16Q13042 620 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 BTBD10Q9BSF8 475 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 FCHO1O14526 889 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 HMGB3O15347 200 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 LRCH4O75427 683 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 TLX1P31314 330 aaPredicted RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 CDKN2BP42772 138 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 NEK3P51956 506 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 EPS8Q12929 822 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 DUSP4Q13115 394 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 TARBP2Q15633 366 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 VARS2Q5ST30 1063 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 INTS11Q5TA45 600 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 BHLHB9Q6PI77 547 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 UNC5AQ6ZN44 842 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 TMEM139Q8IV31 216 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 RTL3Q8N8U3 475 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 LRRC57Q8N9N7 239 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 PIWIL2Q8TC59 973 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 USP6NLQ92738 828 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 KCTD15Q96SI1 283 aaPredicted RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 GAS2L1Q99501 681 aaPredicted RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 EPS8L2Q9H6S3 715 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 PNPLA8Q9NP80 782 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 MAN1C1Q9NR34 630 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 SATB2Q9UPW6 733 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 LZTS1Q9Y250 596 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 RAP2CQ9Y3L5 183 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 RCCD1A6NED2 376 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 CCDC154A6NI56 674 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 CACNB4O00305 520 aaPredicted RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 CD3EAPO15446 510 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 SEC22BO75396 215 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 NTSP30990 170 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 HNRNPH1P31943 449 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 KLHL35Q6PF15 583 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 YTHDF3Q7Z739 585 aaKnown RBP11.51□□□□□ -0.57
COL4A5-201ENST00000328300 FNDC5Q8NAU1 212 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 HDAC7Q8WUI4 952 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 DEC1Q9P2X7 70 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 FBXO5Q9UKT4 447 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 MATN3O15232 486 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 PNLIPRP1P54315 467 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 RNF43Q68DV7 783 aa11.51□□□□□ -0.57
COL4A5-201ENST00000328300 LAYNQ6UX15 382 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms