RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 VDRP11473 427 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 JUNBP17275 347 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 OPRL1P41146 370 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 CCT8P50990 548 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SQLEQ14534 574 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SUPT20HL1Q3ZLR7 823 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 TMEM135Q86UB9 458 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SNX31Q8N9S9 440 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SHCBP1Q8NEM2 672 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 OR52K1Q8NGK4 314 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SPPL2BQ8TCT7 592 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SNX19Q92543 992 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 ANKRD36BP1Q96IX9 119 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 ZNF347Q96SE7 839 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 KCTD15Q96SI1 283 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SLC39A3Q9BRY0 314 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 C9orf16Q9BUW7 83 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SEZ6LQ9BYH1 1024 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 LRRC40Q9H9A6 602 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 GPN2Q9H9Y4 310 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 CCDC167Q9P0B6 97 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 DNMT3BQ9UBC3 853 aaKnown RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 GTF2IRD1Q9UHL9 959 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 PSME2Q9UL46 239 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 OAZ3Q9UMX2 235 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 RBMX2Q9Y388 322 aaKnown RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 RNF103-CHMP3A0A140T963 221 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 HACD1B0YJ81 288 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 PFDN6O15212 129 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 MAFGO15525 162 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 C7P10643 843 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 CAPGP40121 348 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 RGS7P49802 495 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 ATXN1P54253 815 aaKnown RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 CSE1LP55060 971 aaKnown RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 CYBRD1Q53TN4 286 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 TSTD2Q5T7W7 516 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 MAP1SQ66K74 1059 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 HACD2Q6Y1H2 254 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 USP51Q70EK9 711 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 ANKRD13AQ8IZ07 590 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 FSTL5Q8N475 847 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 TMCO5AQ8N6Q1 288 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 NETO2Q8NC67 525 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 ABHD11Q8NFV4 315 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 ZUFSPQ96AP4 578 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 HEXIM2Q96MH2 286 aaKnown RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 GLT1D1Q96MS3 346 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 IFT80Q9P2H3 777 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SLC39A10Q9ULF5 831 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 AURKCQ9UQB9 309 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 ANKRD6Q9Y2G4 727 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 RAD54BQ9Y620 910 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 ZFC3H1O60293 1989 aaKnown RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 DHRS12A0PJE2 317 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 PHGDHO43175 533 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 B4GALT4O60513 344 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 SNRPB2P08579 225 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 HSPA8P11142 646 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 LRPAP1P30533 357 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 HPCAL1P37235 193 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 GSSP48637 474 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 FRG1Q14331 258 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 GRM3Q14832 879 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 LDLRAP1Q5SW96 308 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 C6orf183Q5T699 404 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 ZNF618Q5T7W0 954 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 CMTR2Q8IYT2 770 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 USP33Q8TEY7 942 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 KCTD4Q8WVF5 259 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 HPS1Q92902 700 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 P2RY11Q96G91 374 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 SLC45A3Q96JT2 553 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 SCYL1Q96KG9 808 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 CTRCQ99895 268 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 MRPL4Q9BYD3 311 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 YTHDF1Q9BYJ9 559 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 SOX17Q9H6I2 414 aaPredicted RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 FANCEQ9HB96 536 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 TRPV5Q9NQA5 729 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 SLC27A5Q9Y2P5 690 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 USP3Q9Y6I4 520 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 COL11A2P13942 1736 aaPredicted RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 EI24O14681 340 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 TPD52L2O43399 206 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 NRP2O60462 931 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 TPST1O60507 370 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 MBL2P11226 248 aaPredicted RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 RCVRNP35243 200 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 ANO4Q32M45 955 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 AGAP7PQ5VUJ5 663 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 GTF2IRD2BQ6EKJ0 949 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 CNSTQ6PJW8 725 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 FRA10AC1Q70Z53 315 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms