RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 OR14C36Q8NHC7 312 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 THAP4Q8WY91 577 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 JAKMIP2Q96AA8 810 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 GANQ9H2C0 597 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TAB2Q9NYJ8 693 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 BZW2Q9Y6E2 419 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 EIF3CLB5ME19 914 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 PJA2O43164 708 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 KLHL41O60662 606 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 RTN3O95197 1032 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 NR2F2P24468 414 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 DNASE1P24855 282 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 JAM2P57087 298 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 MAPRE1Q15691 268 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 ASTE1Q2TB18 679 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 SV2CQ496J9 727 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 NEK5Q6P3R8 708 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 ZPBP2Q6X784 338 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 KYAT3Q6YP21 454 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 Q6ZNB5 142 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 HS2ST1Q7LGA3 356 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 CEP97Q8IW35 865 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 CISD2Q8N5K1 135 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 MYCT1Q8N699 235 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 ZNF397Q8NF99 534 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 SLC35C1Q96A29 364 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 IFT74Q96LB3 600 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 EIF3CQ99613 913 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 MENTQ9BUN1 341 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 KLF16Q9BXK1 252 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 HS3ST3A1Q9Y663 406 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3DA0A087WVF3 549 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3IA0A087WXS9 549 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3EA0A087X179 549 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3KA0A087X1G2 549 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 CDC14CA4D256 554 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3FA6NER0 549 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3LB9A6J9 549 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 PLRG1O43660 514 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 CRLF1O75462 422 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3HP0C7X1 549 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 PCSK1P29120 753 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 MTIF2P46199 727 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 USP46P62068 366 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 LRMPQ12912 555 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TAF10Q12962 218 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 ASIC2Q16515 512 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 PHF19Q5T6S3 580 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3GQ6DHY5 549 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3CQ6IPX1 549 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 TBC1D3Q8IZP1 549 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 LMX1AQ8TE12 382 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 PPP1R13BQ96KQ4 1090 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 DPYSL5Q9BPU6 564 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 L2HGDHQ9H9P8 463 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 RCOR3Q9P2K3 495 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 ARMCX3Q9UH62 379 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 LUC7L2Q9Y383 392 aaKnown RBP6.8□□□□□ -1.32
CSTF3-201ENST00000323959 PCDHGA6Q9Y5G7 932 aa6.8□□□□□ -1.32
CSTF3-201ENST00000323959 UQCRHLA0A096LP55 91 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 GCNT3O95395 438 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 CYBBP04839 570 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 UQCRHP07919 91 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 CASP14P31944 242 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 SLC8A1P32418 973 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 SPAM1P38567 509 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 AP3M2P53677 418 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 TUBB4BP68371 445 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 HMBOX1Q6NT76 420 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 WDR59Q6PJI9 974 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 KIAA0907Q7Z7F0 614 aaPredicted RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 FJX1Q86VR8 437 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 UBR7Q8N806 425 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 CALN1Q9BXU9 219 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 CCM2LQ9NUG4 571 aaPredicted RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 DDX43Q9NXZ2 648 aaKnown RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 SLC39A1Q9NY26 324 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 INTUQ9ULD6 942 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 R3HCC1Q9Y3T6 440 aaKnown RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 ADGRG1Q9Y653 693 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 USO1O60763 962 aaKnown RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 LDHAP00338 332 aaKnown RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 FGF3P11487 239 aaPredicted RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 CCL4P13236 92 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 NPTX2P47972 431 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 FZD2Q14332 565 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 FCRL6Q6DN72 434 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 SLFN12LQ6IEE8 588 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 FAM171BQ6P995 826 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 FSTL5Q8N475 847 aaPredicted RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 SCG3Q8WXD2 468 aaKnown RBP6.79□□□□□ -1.32
CSTF3-201ENST00000323959 WBP2Q969T9 261 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 ZNF560Q96MR9 790 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 VPS16Q9H269 839 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 SIX2Q9NPC8 291 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 PPP2R2CQ9Y2T4 447 aa6.79□□□□□ -1.32
CSTF3-201ENST00000323959 B3GALT1Q9Y5Z6 326 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms