RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 GEMP55040 296 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TAS2R40P59535 323 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ST8SIA6P61647 398 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 GNG11P61952 73 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 POLD3Q15054 466 aaPredicted RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 OASLQ15646 514 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 C15orf59Q2T9L4 293 aaPredicted RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 GAB4Q2WGN9 574 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PLEKHG6Q3KR16 790 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ZFYVE27Q5T4F4 411 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ACAD11Q709F0 780 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ZNF765Q7L2R6 523 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 KBTBD6Q86V97 674 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 RELL1Q8IUW5 271 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 DENND1CQ8IV53 801 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 BBS7Q8IWZ6 715 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TMEM130Q8N3G9 435 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 EMC1Q8N766 993 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PLD5Q8N7P1 536 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 MCUQ8NE86 351 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SEC14L1Q92503 715 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 EDEM1Q92611 657 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 GDAP1L1Q96MZ0 367 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 FCRL5Q96RD9 977 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 LYSMD1Q96S90 227 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PRMT8Q9NR22 394 aaPredicted RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 UBA2Q9UBT2 640 aaPredicted RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 EBF1Q9UH73 591 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SFMBT1Q9UHJ3 866 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PYCARDQ9ULZ3 195 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 MACROD2A1Z1Q3 448 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 LRRD1A4D1F6 860 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 C9orf172C9J069 976 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RASA4BC9J798 803 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 C1QTNF3-AMACRE9PGA6 284 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 H0Y626 953 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RFXAPO00287 272 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RASA4O43374 803 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 LIASO43766 372 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 TBL1XO60907 577 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ZNF217O75362 1048 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SPAG6O75602 509 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SOAT2O75908 522 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 KLKB1P03952 638 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 HOXC4P09017 264 aaPredicted RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 TYRP14679 529 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ZNF30P17039 623 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 IL4RP24394 825 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 GDI1P31150 447 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SLC6A4P31645 630 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 GJA4P35212 333 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 OPRD1P41143 372 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 CCR3P51677 355 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 NAB1Q13506 487 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 CAMK2GQ13555 558 aaPredicted RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 CUL1Q13616 776 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC142Q17RM4 750 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 PARP6Q2NL67 630 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 PITRM1Q5JRX3 1037 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SDHAF4Q5VUM1 108 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RNF219Q5W0B1 726 aaPredicted RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RAP1GAP2Q684P5 730 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 TANGO2Q6ICL3 276 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RHBDF2Q6PJF5 856 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 BRAT1Q6PJG6 821 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SLC36A4Q6YBV0 504 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SYT13Q7L8C5 426 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SPRED2Q7Z698 418 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 GALNT7Q86SF2 657 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 CROCCP2Q86T23 111 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 FAM131BQ86XD5 332 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RFX6Q8HWS3 928 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ARHGAP12Q8IWW6 846 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SIX5Q8N196 739 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 PQLC3Q8N755 202 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 DENND6BQ8NEG7 585 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 PCDH19Q8TAB3 1148 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 FEM1CQ96JP0 617 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 FEM1AQ9BSK4 669 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 DESI2Q9BSY9 194 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 BBS2Q9BXC9 721 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 HDAC8Q9BY41 377 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 POLR1EQ9GZS1 481 aaKnown RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SLC25A51Q9H1U9 297 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ARNT2Q9HBZ2 717 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ARHGEF3Q9NR81 526 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 GKN1Q9NS71 199 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 WHRNQ9P202 907 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SALL4Q9UJQ4 1053 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SHOC2Q9UQ13 582 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 KANSL1LA0AUZ9 987 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 MAGEB16A2A368 324 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 DCXO43602 365 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RNASEH1O60930 286 aaKnown RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ACPPP15309 386 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 HLA-DPA1P20036 260 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 OR1E1P30953 314 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 RECQLP46063 649 aaPredicted RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 GRIA4P48058 902 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 DGKEP52429 567 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms