RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 ZNF806P0C7X5 589 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 ITGB7P26010 798 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 MAXP61244 160 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 CSRP2Q16527 193 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 IFI16Q16666 785 aaKnown RBP16.82■□□□□ 0.28
LRRC42-201ENST00000319223 ZNF805Q5CZA5 627 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 TFDP3Q5H9I0 405 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 PEAR1Q5VY43 1037 aaPredicted RBP16.82■□□□□ 0.28
LRRC42-201ENST00000319223 TBC1D3GQ6DHY5 549 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 TBC1D3CQ6IPX1 549 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 SRLQ86TD4 932 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 CCDC50Q8IVM0 306 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 TBC1D3Q8IZP1 549 aaPredicted RBP16.82■□□□□ 0.28
LRRC42-201ENST00000319223 SNX19Q92543 992 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 LRIG1Q96JA1 1093 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 PDLIM2Q96JY6 352 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 ORAI3Q9BRQ5 295 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 HEMGNQ9BXL5 484 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 KCNF1Q9H3M0 494 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 LZTFL1Q9NQ48 299 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 FSCN3Q9NQT6 498 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 DYRK4Q9NR20 520 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 AMFRQ9UKV5 643 aa16.82■□□□□ 0.28
LRRC42-201ENST00000319223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.82■□□□□ 0.28
LRRC42-201ENST00000319223 ZNF292O60281 2723 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 PTPRZ1P23471 2315 aaPredicted RBP16.81■□□□□ 0.28
LRRC42-201ENST00000319223 C16orf96A6NNT2 1141 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 DDX3YO15523 660 aaKnown RBP16.81■□□□□ 0.28
LRRC42-201ENST00000319223 SLC7A4O43246 635 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 PECAM1P16284 738 aaPredicted RBP16.81■□□□□ 0.28
LRRC42-201ENST00000319223 ITIH2P19823 946 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 CCNCP24863 283 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 ABL2P42684 1182 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 SCNN1BP51168 640 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 GSE1Q14687 1217 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 LRRC73Q5JTD7 316 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 PEX26Q7Z412 305 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 LRRC49Q8IUZ0 686 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 RNF10Q8N5U6 811 aaKnown RBP16.81■□□□□ 0.28
LRRC42-201ENST00000319223 TEX26Q8N6G2 289 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 CCNYQ8ND76 341 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 C1orf216Q8TAB5 229 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 MAML1Q92585 1016 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 HDAC11Q96DB2 347 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 CPEB1Q9BZB8 566 aaKnown RBP16.81■□□□□ 0.28
LRRC42-201ENST00000319223 TSGA10Q9BZW7 698 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 MIR1-1HGQ9H1L0 117 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 PCED1AQ9H1Q7 454 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 VPS45Q9NRW7 570 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 LAMA1P25391 3075 aa16.81■□□□□ 0.28
LRRC42-201ENST00000319223 CCDC66A2RUB6 948 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 LRRC72A6NJI9 287 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 MATN3O15232 486 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 KRT86O43790 486 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 LRP3O75074 770 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 PYGMP11217 842 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 ADRB3P13945 408 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 CR2P20023 1033 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 MMP13P45452 471 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 CSNK1DP48730 415 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 NEK3P51956 506 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 IRX4P78413 519 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 RAD51Q06609 339 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 NSUN2Q08J23 767 aaKnown RBP eCLIP16.8■□□□□ 0.28
LRRC42-201ENST00000319223 ZNF235Q14590 738 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 SYCP2LQ5T4T6 812 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 MARC1Q5VT66 337 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 PRR23CQ6ZRP0 262 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 ZSWIM9Q86XI8 627 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 CAMK1DQ8IU85 385 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 PPP1R16AQ96I34 528 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 RBM41Q96IZ5 413 aaKnown RBP16.8■□□□□ 0.28
LRRC42-201ENST00000319223 OLFM3Q96PB7 478 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 OSBPL1AQ9BXW6 950 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 NT5MQ9NPB1 228 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 GGT7Q9UJ14 662 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 PPP2R2CQ9Y2T4 447 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 GVINP1Q7Z2Y8 2422 aa16.8■□□□□ 0.28
LRRC42-201ENST00000319223 SPINT1O43278 529 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 ZFXP17010 805 aaPredicted RBP16.79■□□□□ 0.28
LRRC42-201ENST00000319223 MX2P20592 715 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 MAT2AP31153 395 aaKnown RBP16.79■□□□□ 0.28
LRRC42-201ENST00000319223 RWDD2BP57060 319 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 PPIDQ08752 370 aaKnown RBP16.79■□□□□ 0.28
LRRC42-201ENST00000319223 ZNF211Q13398 564 aaPredicted RBP16.79■□□□□ 0.28
LRRC42-201ENST00000319223 HNRNPDQ14103 355 aaKnown RBP16.79■□□□□ 0.28
LRRC42-201ENST00000319223 IHHQ14623 411 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 WDR45BQ5MNZ6 344 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 FBXL19Q6PCT2 694 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 ZNF662Q6ZS27 426 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 SYCE1Q8N0S2 351 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 ZCCHC9Q8N567 271 aaKnown RBP16.79■□□□□ 0.28
LRRC42-201ENST00000319223 HAUS1Q96CS2 278 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 MGME1Q9BQP7 344 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 SUV39H2Q9H5I1 410 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 ITM2BQ9Y287 266 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 FADS3Q9Y5Q0 445 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 CFAP54Q96N23 3096 aa16.79■□□□□ 0.28
LRRC42-201ENST00000319223 KCNK1O00180 336 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms