RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 FGL2Q14314 439 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 STAT4Q14765 748 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 CYTH1Q15438 398 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 INO80DQ53TQ3 878 aaPredicted RBP16.54■□□□□ 0.24
LSM1-201ENST00000311351 AFMIDQ63HM1 303 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 NEK5Q6P3R8 708 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 ARHGAP36Q6ZRI8 547 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 CPNE8Q86YQ8 564 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 VSTM4Q8IW00 320 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 TP53INP2Q8IXH6 220 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 PNPLA1Q8N8W4 532 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 RHBDD1Q8TEB9 315 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 CASKIN2Q8WXE0 1202 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 DNAJC7Q99615 494 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 SCNM1Q9BWG6 230 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 PACSIN1Q9BY11 444 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 SHROOM3Q8TF72 1996 aa16.54■□□□□ 0.24
LSM1-201ENST00000311351 TDRD6O60522 2096 aaKnown RBP16.54■□□□□ 0.24
LSM1-201ENST00000311351 ARHGAP42A6NI28 874 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 H3BRJ5 948 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 DFFAO00273 331 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 PIGNO95427 931 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 RARAP10276 462 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 HNRNPA2B1P22626 353 aaKnown RBP16.53■□□□□ 0.24
LSM1-201ENST00000311351 EPHA8P29322 1005 aaPredicted RBP16.53■□□□□ 0.24
LSM1-201ENST00000311351 GRK6P43250 576 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 SLC25A11Q02978 314 aaKnown RBP16.53■□□□□ 0.24
LSM1-201ENST00000311351 TRIM14Q14142 442 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 PIGHQ14442 188 aaPredicted RBP16.53■□□□□ 0.24
LSM1-201ENST00000311351 SUZ12Q15022 739 aaKnown RBP16.53■□□□□ 0.24
LSM1-201ENST00000311351 ACAP1Q15027 740 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 DPYSL2Q16555 572 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 KIAA1161Q6NSJ0 714 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 GDPD4Q6W3E5 623 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 GCNT7Q6ZNI0 430 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 IQCHQ86VS3 1027 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 CHCHD4Q8N4Q1 142 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 NIPA2Q8N8Q9 360 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 ZNF564Q8TBZ8 553 aaPredicted RBP16.53■□□□□ 0.24
LSM1-201ENST00000311351 LRIG1Q96JA1 1093 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 NCAPGQ9BPX3 1015 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 OSBPL1AQ9BXW6 950 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 ETNK2Q9NVF9 386 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 IP6K2Q9UHH9 426 aa16.53■□□□□ 0.24
LSM1-201ENST00000311351 ARID1BQ8NFD5 2236 aaPredicted RBP16.53■□□□□ 0.24
LSM1-201ENST00000311351 COL5A1P20908 1838 aaPredicted RBP16.52■□□□□ 0.24
LSM1-201ENST00000311351 PTPRBP23467 1997 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 RAD51BO15315 384 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 AP1G1O43747 822 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 DFNA5O60443 496 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 THEGLP0DJG4 465 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 AKT2P31751 481 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 RGRP47804 291 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 KDM7AQ6ZMT4 941 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 GLRX5Q86SX6 157 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 SLCO6A1Q86UG4 719 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 OR13H1Q8NG92 308 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 KLHDC7BQ96G42 594 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 CSPG4P5Q96PW8 444 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 CAAP1Q9H8G2 361 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 SP110Q9HB58 689 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 PCDH18Q9HCL0 1135 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 TOR4AQ9NXH8 423 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 DONSONQ9NYP3 566 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 KLK13Q9UKR3 277 aa16.52■□□□□ 0.24
LSM1-201ENST00000311351 CACNA1BQ00975 2339 aa16.52■□□□□ 0.23
LSM1-201ENST00000311351 GOLGA8CPA6NN73 597 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 NEMP1O14524 444 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 MFAP3LO75121 409 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 ATXN1LP0C7T5 689 aaKnown RBP16.51■□□□□ 0.23
LSM1-201ENST00000311351 ITIH2P19823 946 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 AMPD1P23109 780 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 GJC1P36383 396 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 ARL4AP40617 200 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 SSR1P43307 286 aaKnown RBP16.51■□□□□ 0.23
LSM1-201ENST00000311351 HCAR3P49019 387 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 ARRB1P49407 418 aaPredicted RBP16.51■□□□□ 0.23
LSM1-201ENST00000311351 ZNF135P52742 658 aaPredicted RBP16.51■□□□□ 0.23
LSM1-201ENST00000311351 RPS21P63220 83 aaKnown RBP16.51■□□□□ 0.23
LSM1-201ENST00000311351 RAD51Q06609 339 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 OVGP1Q12889 678 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 BNIP3Q12983 259 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 SLC18A3Q16572 532 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 ASTE1Q2TB18 679 aaPredicted RBP16.51■□□□□ 0.23
LSM1-201ENST00000311351 BOLA3Q53S33 107 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 POLNQ7Z5Q5 900 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 TSEN2Q8NCE0 465 aaKnown RBP16.51■□□□□ 0.23
LSM1-201ENST00000311351 OR8K1Q8NGG5 319 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 SAP25Q8TEE9 199 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 TEKT4Q8WW24 435 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 RAB7BQ96AH8 199 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 CALN1Q9BXU9 219 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 SLC17A9Q9BYT1 436 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 DEF6Q9H4E7 631 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 ABHD10Q9NUJ1 306 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 CTTNBP2NLQ9P2B4 639 aa16.51■□□□□ 0.23
LSM1-201ENST00000311351 IGLON5A6NGN9 336 aa16.5■□□□□ 0.23
LSM1-201ENST00000311351 C1QTNF9BB2RNN3 333 aa16.5■□□□□ 0.23
LSM1-201ENST00000311351 AREL1O15033 823 aa16.5■□□□□ 0.23
LSM1-201ENST00000311351 TSPAN6O43657 245 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms