RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TAF1CQ15572 869 aaPredicted RBP13.29□□□□□ -0.28
SNED1-201ENST00000310397 FSCN1Q16658 493 aaKnown RBP13.29□□□□□ -0.28
SNED1-201ENST00000310397 PDPRQ8NCN5 879 aa13.29□□□□□ -0.28
SNED1-201ENST00000310397 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
SNED1-201ENST00000310397 G3V2T6 193 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 DGKAP23743 735 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 IDH2P48735 452 aaKnown RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 NPNTQ6UXI9 565 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 SMIM5Q71RC9 77 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 ZNF540Q8NDQ6 660 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 CD101Q93033 1021 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 NKD2Q969F2 451 aaPredicted RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 MYLPFQ96A32 169 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 TBCDQ9BTW9 1192 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 ZSCAN32Q9NX65 697 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 MRPL39Q9NYK5 338 aaKnown RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 SLC17A7Q9P2U7 560 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 DNAJB4Q9UDY4 337 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 ZMYM5Q9UJ78 669 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 ZNF112Q9UJU3 913 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 DDX3YO15523 660 aaKnown RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 NRP2O60462 931 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 LYNP07948 512 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 THPOP40225 353 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 CDC42P60953 191 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 FUT2Q10981 343 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 NANOGNBQ7Z5D8 188 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 FAM47BQ8NA70 645 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 MARK4Q96L34 752 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 RHOJQ9H4E5 214 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 ABCC13Q9NSE7 274 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 GALNT8Q9NY28 637 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 HOXA2O43364 376 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 FECHP22830 423 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 CCT3P49368 545 aaKnown RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 GMPSP49915 693 aaPredicted RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 MAPK10P53779 464 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 SHROOM1Q2M3G4 852 aaPredicted RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 CLYBLQ8N0X4 340 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 CNTD1Q8N815 330 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 SETD4Q9NVD3 440 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 PLA2G4CQ9UP65 541 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 FAM50BQ9Y247 325 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 A0A1W2PPM1 405 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 CST1P01037 141 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 COL6A2P12110 1019 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 S100A1P23297 94 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 GSSP48637 474 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 USP46P62068 366 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 ARSHQ5FYA8 562 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 FAM183BPQ6ZVS7 135 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 PGAM4Q8N0Y7 254 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 IKZF3Q9UKT9 509 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 PPP2R3BQ9Y5P8 575 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 BCL9O00512 1426 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 TMEM150BA6NC51 233 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 SIN3BO75182 1162 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 RPL3P39023 403 aaKnown RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 CENPAP49450 140 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 RAB27AP51159 221 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 ZIK1Q3SY52 487 aaPredicted RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 RNF220Q5VTB9 566 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 OOSP2Q86WS3 158 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 PSMA8Q8TAA3 256 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 HELQQ8TDG4 1101 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 PNPLA8Q9NP80 782 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 DNAJC28Q9NX36 388 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 KANSL3Q9P2N6 904 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 HMGB3O15347 200 aaKnown RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 TFEBP19484 476 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 TPSB2P20231 275 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 TPSAB1Q15661 275 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 PERM1Q5SV97 790 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 ZNF280DQ6N043 979 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 RETSATQ6NUM9 610 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 EIF3MQ7L2H7 374 aaKnown RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 MRPS31Q92665 395 aaKnown RBP13.28□□□□□ -0.28
SNED1-201ENST00000310397 TNFRSF25Q93038 417 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 TMEM169Q96HH4 297 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 COX4I2Q96KJ9 171 aa13.28□□□□□ -0.28
SNED1-201ENST00000310397 A8MUI8 341 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 DCDC2CA8MYV0 355 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.27□□□□□ -0.28
SNED1-201ENST00000310397 ZBTB14O43829 449 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 SPATA31C1P0DKV0 1188 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 STXBP5Q5T5C0 1151 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 KRT74Q7RTS7 529 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 CARNMT1Q8N4J0 409 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 RAET1EQ8TD07 263 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 EZH1Q92800 747 aaPredicted RBP13.27□□□□□ -0.28
SNED1-201ENST00000310397 MAGEL2Q9UJ55 1249 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 LRG1P02750 347 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 CNPP09543 421 aaKnown RBP13.27□□□□□ -0.28
SNED1-201ENST00000310397 TAS2R40P59535 323 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 ELAVL2Q12926 359 aaKnown RBP13.27□□□□□ -0.28
SNED1-201ENST00000310397 OSMRQ99650 979 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 TGFB1I1O43294 461 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 DNAJA2O60884 412 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 USP17L7P0C7H9 530 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 HGFP14210 728 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms