RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 MYO16Q9Y6X6 1858 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 COL4A4P53420 1690 aaPredicted RBP16.6■□□□□ 0.25
SYVN1-202ENST00000307289 MATN2O00339 956 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 AIM2O14862 343 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 CAPN15O75808 1086 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 CIB2O75838 187 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 COX4I1P13073 169 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 ATXN3P54252 364 aaPredicted RBP16.6■□□□□ 0.25
SYVN1-202ENST00000307289 RAB10P61026 200 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 SLC12A1Q13621 1099 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 FRG1Q14331 258 aaKnown RBP16.6■□□□□ 0.25
SYVN1-202ENST00000307289 RASIP1Q5U651 963 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 AFMIDQ63HM1 303 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 KLHDC8BQ8IXV7 354 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 COLGALT2Q8IYK4 626 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 ARHGAP24Q8N264 748 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 RNF148Q8N7C7 305 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 STYXQ8WUJ0 223 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 CATSPER2Q96P56 530 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 GPR62Q9BZJ7 368 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 ILKAPQ9H0C8 392 aaPredicted RBP16.6■□□□□ 0.25
SYVN1-202ENST00000307289 FBXO5Q9UKT4 447 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 PCDHB8Q9UN66 801 aa16.6■□□□□ 0.25
SYVN1-202ENST00000307289 MMP2P08253 660 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 TSPAN8P19075 237 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 ACVRL1P37023 503 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 BLMHQ13867 455 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 CCNIQ14094 377 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 MAPRE1Q15691 268 aaKnown RBP16.59■□□□□ 0.25
SYVN1-202ENST00000307289 VARS2Q5ST30 1063 aaKnown RBP16.59■□□□□ 0.25
SYVN1-202ENST00000307289 LIPMQ5VYY2 423 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 NXNQ6DKJ4 435 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 TRAF7Q6Q0C0 670 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 KDELC1Q6UW63 502 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 GLB1LQ6UWU2 654 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 ZNF683Q8IZ20 524 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 CFAP52Q8N1V2 620 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 ZCWPW1Q9H0M4 648 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 C1orf21Q9H246 121 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 CDH22Q9UJ99 828 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 SSX2IPQ9Y2D8 614 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 FGF10O15520 208 aaPredicted RBP16.59■□□□□ 0.25
SYVN1-202ENST00000307289 STMN1P16949 149 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 TBX4P57082 545 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 NEPROQ6NW34 567 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 FBXL22Q6P050 247 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 NUP93Q8N1F7 819 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 SCML4Q8N228 414 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 ANKRD49Q8WVL7 239 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 SLC39A13Q96H72 371 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 DRC3Q9H069 523 aa16.59■□□□□ 0.25
SYVN1-202ENST00000307289 MARCH4Q9P2E8 410 aaPredicted RBP16.59■□□□□ 0.25
SYVN1-202ENST00000307289 MUSKO15146 869 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 CA12O43570 354 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 SMNDC1O75940 238 aaKnown RBP eCLIP16.58■□□□□ 0.256e-7■■□□□ 13.7
SYVN1-202ENST00000307289 GLDCP23378 1020 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 RPL14P50914 215 aaKnown RBP16.58■□□□□ 0.25
SYVN1-202ENST00000307289 GEMP55040 296 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 DSC1Q08554 894 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 PIM3Q86V86 326 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 OR13J1Q8NGT2 312 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 SLC26A7Q8TE54 656 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 SMIM14Q96QK8 99 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 SIKE1Q9BRV8 207 aa16.58■□□□□ 0.25
SYVN1-202ENST00000307289 GEMIN8Q9NWZ8 242 aaKnown RBP16.58■□□□□ 0.25
SYVN1-202ENST00000307289 ABT1Q9ULW3 272 aaKnown RBP16.58■□□□□ 0.25
SYVN1-202ENST00000307289 STX16-NPEPL1H3BU86 382 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 PRSS56P0CW18 603 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 HDCP19113 662 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 KCNC1P48547 511 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 TBCCQ15814 346 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 TRMT5Q32P41 509 aaKnown RBP16.58■□□□□ 0.24
SYVN1-202ENST00000307289 FAM171A1Q5VUB5 890 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 TMEM173Q86WV6 379 aaPredicted RBP16.58■□□□□ 0.24
SYVN1-202ENST00000307289 SNX32Q86XE0 403 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 CNTN4Q8IWV2 1026 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 PCDH10Q9P2E7 1040 aa16.58■□□□□ 0.24
SYVN1-202ENST00000307289 DPPA5A6NC42 116 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 TADA2AO75478 443 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 MT-CO1P00395 513 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 TYMPP19971 482 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 CYP2C18P33260 490 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 PSEN1P49768 467 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 ZNF135P52742 658 aaPredicted RBP16.57■□□□□ 0.24
SYVN1-202ENST00000307289 ACLYP53396 1101 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 TBL3Q12788 808 aaKnown RBP16.57■□□□□ 0.24
SYVN1-202ENST00000307289 TAF10Q12962 218 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 LPCAT4Q643R3 524 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 MON1AQ86VX9 555 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 C2CD4AQ8NCU7 369 aaPredicted RBP16.57■□□□□ 0.24
SYVN1-202ENST00000307289 GIPC2Q8TF65 315 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 PHF21BQ96EK2 531 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 SERPINB11Q96P15 392 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 DDX50Q9BQ39 737 aaKnown RBP16.57■□□□□ 0.24
SYVN1-202ENST00000307289 STN1Q9H668 368 aaKnown RBP16.57■□□□□ 0.24
SYVN1-202ENST00000307289 CCSER2Q9H7U1 834 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 ENTPD7Q9NQZ7 604 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 MSLNQ13421 630 aaPredicted RBP16.57■□□□□ 0.24
SYVN1-202ENST00000307289 TSNAXIP1Q2TAA8 658 aa16.57■□□□□ 0.24
SYVN1-202ENST00000307289 CTXN3Q4LDR2 81 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms