RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 FTH1P19P0C7X4 201 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 IL1R2P27930 398 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 EIF4A3P38919 411 aaKnown RBP26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 RXRGP48443 463 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 GRM3Q14832 879 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 CYTH1Q15438 398 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 TSR1Q2NL82 804 aaKnown RBP26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 SMTNL2Q2TAL5 461 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 PRAMEF14Q5SWL7 426 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 SPATS2Q86XZ4 545 aaKnown RBP26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 RNF214Q8ND24 703 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 TEKT4Q8WW24 435 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 HSPH1Q92598 858 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 MYOCQ99972 504 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 SCNM1Q9BWG6 230 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 SLC17A9Q9BYT1 436 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 CPEB1Q9BZB8 566 aaKnown RBP26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 DEF6Q9H4E7 631 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 LHX3Q9UBR4 397 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 NENFQ9UMX5 172 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 ITGAVP06756 1048 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 ABL2P42684 1182 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 MAPK8IP2Q13387 824 aaPredicted RBP26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 SLC18A3Q16572 532 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 VSTM4Q8IW00 320 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 ARHGAP12Q8IWW6 846 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 VOPP1Q96AW1 172 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 BTBD6Q96KE9 485 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 SP110Q9HB58 689 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 DKK3Q9UBP4 350 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 CA5BQ9Y2D0 317 aa26.79■■□□□ 1.88
CDKN2A-201ENST00000304494 DFFAO00273 331 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 HYAL3O43820 417 aaPredicted RBP26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 TOP3BO95985 862 aaKnown RBP26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 THEGLP0DJG4 465 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 RARAP10276 462 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 TCF4P15884 667 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 EPHA8P29322 1005 aaPredicted RBP26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 SGCGQ13326 291 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 RFTN1Q14699 578 aaPredicted RBP26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 SHBQ15464 509 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 TTC7BQ86TV6 843 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 NPWQ8N729 165 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 NETO2Q8NC67 525 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 ZNF564Q8TBZ8 553 aaPredicted RBP26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 SAP25Q8TEE9 199 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 CTNNBL1Q8WYA6 563 aaPredicted RBP26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 EXOC2Q96KP1 924 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 FZD3Q9NPG1 666 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 NEUROG3Q9Y4Z2 214 aa26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 TP53BP1Q12888 1972 aaPredicted RBP26.78■■□□□ 1.88
CDKN2A-201ENST00000304494 SSU72P8A0A1W2PR75 194 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 TNFSF14O43557 240 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 PALMO75781 387 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 SPINK2P20155 84 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 SLC25A11Q02978 314 aaKnown RBP26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 IL10RBQ08334 325 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 HADHQ16836 314 aaKnown RBP26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 TMCO3Q6UWJ1 677 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 POLNQ7Z5Q5 900 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 RAB44Q7Z6P3 723 aaPredicted RBP26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 GATAD2AQ86YP4 633 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 HCAR2Q8TDS4 363 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 ADAMTS14Q8WXS8 1223 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 UVRAGQ9P2Y5 699 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 LCMT1Q9UIC8 334 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 HS3ST3A1Q9Y663 406 aa26.77■■□□□ 1.88
CDKN2A-201ENST00000304494 A6NNZ2 444 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 PAK4O96013 591 aaPredicted RBP26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 H2AFZP0C0S5 128 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 SUOXP51687 545 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 H2AFVQ71UI9 128 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 ABI3BPQ7Z7G0 1075 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 DCP2Q8IU60 420 aaKnown RBP26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 ASB12Q8WXK4 309 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 CSPG4P5Q96PW8 444 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 TUBGCP5Q96RT8 1024 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 CINPQ9BW66 212 aaPredicted RBP26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 C1QTNF2Q9BXJ5 285 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 ABHD10Q9NUJ1 306 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 CTTNBP2NLQ9P2B4 639 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 FTSJ1Q9UET6 329 aa26.76■■□□□ 1.87
CDKN2A-201ENST00000304494 AREL1O15033 823 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 INSIG1O15503 277 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 SSR1P43307 286 aaKnown RBP26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 CSNK1DP48730 415 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 FGL2Q14314 439 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 GCNT7Q6ZNI0 430 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 CHCHD4Q8N4Q1 142 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 OR13H1Q8NG92 308 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 ZNF641Q96N77 438 aaPredicted RBP26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 LENG8Q96PV6 779 aaPredicted RBP26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 CALN1Q9BXU9 219 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 IPO11Q9UI26 975 aaKnown RBP26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 ITM2BQ9Y287 266 aa26.75■■□□□ 1.87
CDKN2A-201ENST00000304494 IGLON5A6NGN9 336 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 AKR1B10O60218 316 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 MFAP3LO75121 409 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 XPAP23025 273 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms