RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 EPS8L2Q9H6S3 715 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 CLK4Q9HAZ1 481 aaKnown RBP8.04□□□□□ -1.12
NKRF-201ENST00000304449 OLAHQ9NV23 265 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 TMED5Q9Y3A6 229 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 AP4S1Q9Y587 144 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 DICER1Q9UPY3 1922 aaKnown RBP8.04□□□□□ -1.12
NKRF-201ENST00000304449 ZBBXA8MT70 800 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 H3BNH8 94 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 GMNNO75496 209 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 DPP6P42658 865 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 NSUN2Q08J23 767 aaKnown RBP eCLIP8.04□□□□□ -1.12
NKRF-201ENST00000304449 DNASE1L3Q13609 305 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 IKBKEQ14164 716 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 PTK2BQ14289 1009 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 PLCL1Q15111 1095 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 ZNF829Q3KNS6 432 aaPredicted RBP8.04□□□□□ -1.12
NKRF-201ENST00000304449 TAPT1Q6NXT6 567 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 UNC93AQ86WB7 457 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 ZNF567Q8N184 647 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 SIX5Q8N196 739 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 FIBCD1Q8N539 461 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 LZTR1Q8N653 840 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 CPSF7Q8N684 471 aaKnown RBP8.04□□□□□ -1.12
NKRF-201ENST00000304449 ANKRD52Q8NB46 1076 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 ACVR1CQ8NER5 493 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 FAM110BQ8TC76 370 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 SNX27Q96L92 541 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 RBBP8Q99708 897 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 EIF2AQ9BY44 585 aaKnown RBP8.04□□□□□ -1.12
NKRF-201ENST00000304449 CDH19Q9H159 772 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 IL1RL2Q9HB29 575 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 ZFYVE28Q9HCC9 887 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 SNX15Q9NRS6 342 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 POU2F3Q9UKI9 436 aa8.04□□□□□ -1.12
NKRF-201ENST00000304449 MYLKQ15746 1914 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 CNOT3O75175 753 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 MPSTP25325 297 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 EPHX2P34913 555 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 GLRBP48167 497 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 IREB2P48200 963 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 PITX1P78337 314 aaPredicted RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 PMS2P3Q13401 168 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 OLIG2Q13516 323 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 USP41Q3LFD5 358 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 CCDC153Q494R4 210 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 HEATR6Q6AI08 1181 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 C16orf89Q6UX73 402 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 DLK2Q6UY11 383 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 BTLAQ7Z6A9 289 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 PARP8Q8N3A8 854 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 TDRD5Q8NAT2 981 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 BPIFB6Q8NFQ5 453 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 DHRS1Q96LJ7 313 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 RTKNQ9BST9 563 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 MRPL46Q9H2W6 279 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 PLEKHA5Q9HAU0 1116 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 GGA3Q9NZ52 723 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 ADAM28Q9UKQ2 775 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 V9GYQ6 96 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 COL1A2P08123 1366 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 ZNF839A8K0R7 811 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 PIRO00625 290 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 VTNP04004 478 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 ARSAP15289 507 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 ZNF26P17031 533 aaPredicted RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 ACAT1P24752 427 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 LIMK2P53671 638 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 BFSP2Q13515 415 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 SF3B4Q15427 424 aaKnown RBP eCLIP8.03□□□□□ -1.12
NKRF-201ENST00000304449 DLG2Q15700 870 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 DALRD3Q5D0E6 543 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 GRTP1Q5TC63 336 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 ZNF772Q68DY9 489 aaPredicted RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 FSTL4Q6MZW2 842 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 LRRC8EQ6NSJ5 796 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 BORAQ6PGQ7 559 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 HERC6Q8IVU3 1022 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 CHERPQ8IWX8 916 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 SIX6OS1Q8N1H7 587 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 DCLK2Q8N568 766 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 LRRC52Q8N7C0 313 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 SCAIQ8N9R8 606 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 CAPSLQ8WWF8 208 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 EMID1Q96A84 441 aaPredicted RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 CLIP3Q96DZ5 547 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 CERS2Q96G23 380 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 CPNE1Q99829 537 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 FAM96AQ9H5X1 160 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 CAB39LQ9H9S4 337 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 POLE4Q9NR33 117 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 PNPLA3Q9NST1 481 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 FAM49BQ9NUQ9 324 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 ERAP1Q9NZ08 941 aa8.03□□□□□ -1.12
NKRF-201ENST00000304449 GMPR2Q9P2T1 348 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 WARS2Q9UGM6 360 aaKnown RBP8.03□□□□□ -1.12
NKRF-201ENST00000304449 H3BMQ9 156 aa8.02□□□□□ -1.12
NKRF-201ENST00000304449 RNF103O00237 685 aa8.02□□□□□ -1.12
NKRF-201ENST00000304449 LGALS2P05162 132 aa8.02□□□□□ -1.12
NKRF-201ENST00000304449 FYNP06241 537 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms