RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PRMT5O14744 637 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-201ENST00000302516 B3GAT3O94766 335 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 FGRP09769 529 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 NFKB1P19838 968 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 CCR3P51677 355 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 MFSD4BQ5TF39 518 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 FOXR1Q6PIV2 292 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 ILDR1Q86SU0 546 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-201ENST00000302516 LRRN4CLQ8ND94 238 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 CDH19Q9H159 772 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 EPB41L1Q9H4G0 881 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 CNTNAP2Q9UHC6 1331 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 STARP49675 285 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 PFKFB4Q16877 469 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 BMT2Q1RMZ1 405 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 RFTN2Q52LD8 501 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TRIM40Q6P9F5 258 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 BTBD9Q96Q07 612 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 MAGEE1Q9HCI5 957 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 GPRC5CQ9NQ84 441 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 VPS45Q9NRW7 570 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 EFR3BQ9Y2G0 817 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.71□□□□□ -1.18
SF3B3-201ENST00000302516 CRHR1P34998 444 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 PRKG2Q13237 762 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 DGCR6Q14129 220 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 RUNDC3AQ59EK9 446 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 NEPROQ6NW34 567 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 SPATA19Q7Z5L4 167 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 AHI1Q8N157 1196 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 LPCAT1Q8NF37 534 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TMEM169Q96HH4 297 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TAAR1Q96RJ0 339 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 HACL1Q9UJ83 578 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TULP3O75386 442 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 CASP5P51878 434 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 SLC5A9Q2M3M2 681 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 SLC27A1Q6PCB7 646 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 GPRIN3Q6ZVF9 776 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 CLEC10AQ8IUN9 316 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 KLHL23Q8NBE8 558 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 EPS8L1Q8TE68 723 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 PPP1R16AQ96I34 528 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 DSN1Q9H410 356 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 EHD1Q9H4M9 534 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 ABCC13Q9NSE7 274 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 PLA2G4CQ9UP65 541 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 G3V2T6 193 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SERPINB7O75635 380 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 NDST1P52848 882 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PKNOX1P55347 436 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 STARD3Q14849 445 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 TAF1CQ15572 869 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 LSM12Q3MHD2 195 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 DNAJB7Q7Z6W7 309 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 BAP1Q92560 729 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 MRPL9Q9BYD2 267 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 GMIPQ9P107 970 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF221Q9UK13 617 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 CCNE2O96020 404 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 URODP06132 367 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 THPOP40225 353 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PLCL1Q15111 1095 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ERICH5Q6P6B1 374 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PQLC1Q8N2U9 271 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 TCAIMQ8N3R3 496 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 RASGEF1CQ8N431 466 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PCSK9Q8NBP7 692 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 MTG1Q9BT17 334 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SLC4A5Q9BY07 1137 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 FETUBQ9UGM5 382 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 MYO18AQ92614 2054 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 CYP3A7-CYP3A51PA0A087WV96 503 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 DYNC1LI2O43237 492 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 AP5Z1O43299 807 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PRG2P13727 222 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 CYP3A7P24462 503 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 HTR7P34969 479 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ALDH9A1P49189 494 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 RPS6KA3P51812 740 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 FKBP1AP62942 108 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SLC25A24Q6NUK1 477 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SH3RF1Q7Z6J0 888 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SVOPLQ8N434 492 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 TP53INP1Q96A56 240 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ATG4CQ96DT6 458 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 C7orf26Q96N11 449 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 UROC1Q96N76 676 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 RTFDC1Q9BY42 306 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 TMEM39BQ9GZU3 492 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PTTG2Q9NZH5 202 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PSME2Q9UL46 239 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PCDHB5Q9Y5E4 795 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ACKR2O00590 384 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 LDOC1O95751 146 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 LTFP02788 710 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SHBGP04278 402 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 HIST1H2ABP04908 130 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 CXCL8P10145 99 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PTX3P26022 381 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms