RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ASAH2Q9NR71 780 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 MTO1Q9Y2Z2 717 aaKnown RBP22.54■■□□□ 1.2
SMAD1-201ENST00000302085 TRAV19A0A0A6YYK7 116 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 H0Y626 953 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 MYOGP15173 224 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 MZF1P28698 734 aaPredicted RBP22.53■■□□□ 1.2
SMAD1-201ENST00000302085 RGRP47804 291 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 IFT88Q13099 833 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 CAMK1Q14012 370 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 RFTN1Q14699 578 aaPredicted RBP22.53■■□□□ 1.2
SMAD1-201ENST00000302085 ARMC3Q5W041 872 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 FSTL4Q6MZW2 842 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 ZNF783Q6ZMS7 281 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 DCLK2Q8N568 766 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 MICAL1Q8TDZ2 1067 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 CINPQ9BW66 212 aaPredicted RBP22.53■■□□□ 1.2
SMAD1-201ENST00000302085 PRKD2Q9BZL6 878 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 MIA3Q5JRA6 1907 aa22.53■■□□□ 1.2
SMAD1-201ENST00000302085 HEATR9A2RTY3 570 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 ZMPSTE24O75844 475 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 CD160O95971 181 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 TOP3BO95985 862 aaKnown RBP22.52■■□□□ 1.2
SMAD1-201ENST00000302085 IRS1P35568 1242 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 ABCG1P45844 678 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 SERPINB4P48594 390 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 CSE1LP55060 971 aaKnown RBP22.52■■□□□ 1.2
SMAD1-201ENST00000302085 CDK18Q07002 472 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 ATXN7L3BQ96GX2 97 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 FEM1CQ96JP0 617 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 NOD2Q9HC29 1040 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 LSM7Q9UK45 103 aaKnown RBP22.52■■□□□ 1.2
SMAD1-201ENST00000302085 OR51B4Q9Y5P0 310 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 GRM6O15303 877 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 SNAP91O60641 907 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 LUC7L3O95232 432 aaKnown RBP22.52■■□□□ 1.2
SMAD1-201ENST00000302085 ARF5P84085 180 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 PPM1JQ5JR12 505 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 TSTD2Q5T7W7 516 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 CNTN4Q8IWV2 1026 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 BBS7Q8IWZ6 715 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 CNPY4Q8N129 248 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 WFDC5Q8TCV5 224 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 PTPRN2Q92932 1015 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 ISL2Q96A47 359 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 GCNAQ96QF7 691 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 FEM1AQ9BSK4 669 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 SMG9Q9H0W8 520 aaKnown RBP22.52■■□□□ 1.2
SMAD1-201ENST00000302085 MANSC1Q9H8J5 431 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 PHTF1Q9UMS5 762 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 RWDD3Q9Y3V2 267 aa22.52■■□□□ 1.2
SMAD1-201ENST00000302085 MTCL1Q9Y4B5 1905 aaKnown RBP22.51■■□□□ 1.19
SMAD1-201ENST00000302085 RFPL2O75678 378 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 EPOP01588 193 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 SERPINF2P08697 491 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 CR2P20023 1033 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 GABRB3P28472 473 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 MAGEA12P43365 314 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 UBE3AQ05086 875 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 ITIH4Q14624 930 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 KIAA0930Q6ICG6 404 aaPredicted RBP22.51■■□□□ 1.19
SMAD1-201ENST00000302085 ARMC2Q8NEN0 867 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 ACVR1CQ8NER5 493 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 SH3BP1Q9Y3L3 701 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 USP15Q9Y4E8 981 aaPredicted RBP22.51■■□□□ 1.19
SMAD1-201ENST00000302085 DOCK6Q96HP0 2047 aa22.51■■□□□ 1.19
SMAD1-201ENST00000302085 MROH6A6NGR9 719 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 C5orf67F2Z3F1 127 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 LEFTY2O00292 366 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 EDF1O60869 148 aaKnown RBP22.5■■□□□ 1.19
SMAD1-201ENST00000302085 SIN3BO75182 1162 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 TYK2P29597 1187 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 SPATA21Q7Z572 469 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 CMC1Q7Z7K0 106 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 SHKBP1Q8TBC3 707 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 BHMTQ93088 406 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 TCEAL4Q96EI5 215 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 ALG14Q96F25 216 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 IFT43Q96FT9 208 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 SNX15Q9NRS6 342 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 NSMCE4AQ9NXX6 385 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 ZNF510Q9Y2H8 683 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 AHSGP02765 367 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 PFKLP17858 780 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 SCNN1BP51168 640 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 EPHA5P54756 1037 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 LINGO4Q6UY18 593 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 ZC3HC1Q86WB0 502 aaKnown RBP22.5■■□□□ 1.19
SMAD1-201ENST00000302085 DENND6AQ8IWF6 608 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 GRAMD1AQ96CP6 724 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 TRIB3Q96RU7 358 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 MAN1C1Q9NR34 630 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 HAUS2Q9NVX0 235 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 DNMT3BQ9UBC3 853 aaKnown RBP22.5■■□□□ 1.19
SMAD1-201ENST00000302085 EMCNQ9ULC0 261 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 STARD13Q9Y3M8 1113 aa22.5■■□□□ 1.19
SMAD1-201ENST00000302085 TYW5A2RUC4 315 aaKnown RBP22.49■■□□□ 1.19
SMAD1-201ENST00000302085 ANKRD65E5RJM6 399 aa22.49■■□□□ 1.19
SMAD1-201ENST00000302085 TIMM44O43615 452 aa22.49■■□□□ 1.19
SMAD1-201ENST00000302085 MOSPD3O75425 235 aa22.49■■□□□ 1.19
SMAD1-201ENST00000302085 PAPSS2O95340 614 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms