RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 TRIB2Q92519 343 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 IFT43Q96FT9 208 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 RPRD1AQ96P16 312 aaPredicted RBP13.76□□□□□ -0.21
CDH8-201ENST00000299345 S100A14Q9HCY8 104 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 TRMT13Q9NUP7 481 aaKnown RBP13.76□□□□□ -0.21
CDH8-201ENST00000299345 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 MATN2O00339 956 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 MMEL1Q495T6 779 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 SH2D4BQ5SQS7 431 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 SCML4Q8N228 414 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 ACTRT2Q8TDY3 377 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 STYXQ8WUJ0 223 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 FBXO32Q969P5 355 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 RTKNQ9BST9 563 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 ZYG11BQ9C0D3 744 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 NACA2Q9H009 215 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 POMKQ9H5K3 350 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
CDH8-201ENST00000299345 PCDHB5Q9Y5E4 795 aa13.76□□□□□ -0.21
CDH8-201ENST00000299345 A0A087X1B8 175 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 TRPC5OSA6NMA1 111 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 ZBTB14O43829 449 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 UPP2O95045 317 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 UBTFL6P0CB48 400 aaPredicted RBP13.75□□□□□ -0.21
CDH8-201ENST00000299345 ITGAXP20702 1163 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 SREBF2Q12772 1141 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 CTXN3Q4LDR2 81 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 NOMO2Q5JPE7 1267 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 TMCO4Q5TGY1 634 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 SCD5Q86SK9 330 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 PCSK9Q8NBP7 692 aaKnown RBP13.75□□□□□ -0.21
CDH8-201ENST00000299345 GPR152Q8TDT2 470 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 MRPL57Q9BQC6 102 aaKnown RBP13.75□□□□□ -0.21
CDH8-201ENST00000299345 SLC25A51Q9H1U9 297 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 KCNU1A8MYU2 1149 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 DLX3O60479 287 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 CYBAP13498 195 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 PRDX6P30041 224 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 POLD2P49005 469 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 POU4F1Q01851 419 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 KIAA0930Q6ICG6 404 aaPredicted RBP13.75□□□□□ -0.21
CDH8-201ENST00000299345 PIWIL4Q7Z3Z4 852 aaKnown RBP13.75□□□□□ -0.21
CDH8-201ENST00000299345 FBXW8Q8N3Y1 598 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 EXT2Q93063 718 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 POMPQ9Y244 141 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 MAGEA13PA6NCF6 341 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 SLC4A1P02730 911 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 ATP5F1P24539 256 aaPredicted RBP13.75□□□□□ -0.21
CDH8-201ENST00000299345 GABRB3P28472 473 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 GRK4P32298 578 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 HK2P52789 917 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 PLK1P53350 603 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 HNRNPDQ14103 355 aaKnown RBP13.75□□□□□ -0.21
CDH8-201ENST00000299345 ZNF235Q14590 738 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 PSMD5Q16401 504 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 CMPK2Q5EBM0 449 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 DHDDSQ86SQ9 333 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 UCMAQ8WVF2 138 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 MARK4Q96L34 752 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 ZDHHC2Q9UIJ5 367 aa13.75□□□□□ -0.21
CDH8-201ENST00000299345 ZNF195O14628 629 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 PPARGP37231 505 aaPredicted RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 MGAT5BQ3V5L5 792 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 CNSTQ6PJW8 725 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 BNC2Q6ZN30 1099 aaPredicted RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 ATG14Q6ZNE5 492 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 CEP97Q8IW35 865 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 GBP5Q96PP8 586 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 CDRT15Q96T59 188 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 SEPT5Q99719 369 aaPredicted RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 EFCAB1Q9HAE3 211 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 EML4Q9HC35 981 aaKnown RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 GMIPQ9P107 970 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 DNAJB4Q9UDY4 337 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 GABRQQ9UN88 632 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 SLC12A8A0AV02 714 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 DPPA5A6NC42 116 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 CCNT2O60583 730 aaKnown RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 CCDC166P0CW27 439 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 HNRNPLP14866 589 aaKnown RBP eCLIP13.74□□□□□ -0.21
CDH8-201ENST00000299345 YWHAQP27348 245 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 MGAT3Q09327 533 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 ITGA7Q13683 1181 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 RAP1GAP2Q684P5 730 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 TRIM67Q6ZTA4 783 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 ATAD1Q8NBU5 361 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 RP9Q8TA86 221 aaKnown RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 HEXDCQ8WVB3 486 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 CCDC126Q96EE4 140 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 PHF21BQ96EK2 531 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 TMA16Q96EY4 203 aaKnown RBP13.74□□□□□ -0.21
CDH8-201ENST00000299345 HMCESQ96FZ2 354 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 MRGPRX2Q96LB1 330 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 ECSITQ9BQ95 431 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 RAMP2O60895 175 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 SMIM24O75264 130 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 RAG1P15918 1043 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 RHOQP17081 205 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 PGFP49763 221 aa13.74□□□□□ -0.21
CDH8-201ENST00000299345 TRIM32Q13049 653 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms