RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RNASEH2AO75792 299 aaKnown RBP24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 ME2P23368 584 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 ADGRE1Q14246 886 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 MAP3K21Q5TCX8 1036 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 SH3RF2Q8TEC5 729 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 BRI3BPQ8WY22 251 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 DPF3Q92784 378 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 ZNF385DQ9H6B1 395 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 LZTS1Q9Y250 596 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 SDHDO14521 159 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 BRCC3P46736 316 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 ARCN1P48444 511 aaKnown RBP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 CSRP3P50461 194 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 MAXP61244 160 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 IL23RQ5VWK5 629 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 IQSEC1Q6DN90 963 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 CYP2R1Q6VVX0 501 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 OR9I1Q8NGQ6 314 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 PRPF18Q99633 342 aaKnown RBP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 PRDM16Q9HAZ2 1276 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 TRPC7Q9HCX4 862 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 FLRT1Q9NZU1 646 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 PRPF19Q9UMS4 504 aaKnown RBP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 HLA-DQB2P05538 268 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 PSEN2P49810 448 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 C1QTNF8P60827 252 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 TIGD5Q53EQ6 642 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 PITRM1Q5JRX3 1037 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 PGAM4Q8N0Y7 254 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 METTL25Q8N6Q8 603 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 SLC39A3Q9BRY0 314 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 FSD1LQ9BXM9 530 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 EFCAB1Q9HAE3 211 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 RBM22Q9NW64 420 aaKnown RBP eCLIP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 C6orf203Q9P0P8 240 aaPredicted RBP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 TBC1D30Q9Y2I9 924 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 TSC2P49815 1807 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 RALGAPA2Q2PPJ7 1873 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 STRNO43815 780 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 H2AFYO75367 372 aaKnown RBP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 PABPC4LP0CB38 370 aaKnown RBP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 LRPAP1P30533 357 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 EPHX2P34913 555 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 NME5P56597 212 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 PTK2BQ14289 1009 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 RARS2Q5T160 578 aaKnown RBP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 RBM44Q6ZP01 1051 aaKnown RBP24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 ARHGAP12Q8IWW6 846 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 OLFM1Q99784 485 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 ANKRD6Q9Y2G4 727 aa24.65■■□□□ 1.54
SPTSSA-201ENST00000298130 F8W810 466 aa24.64■■□□□ 1.54
SPTSSA-201ENST00000298130 MTSS1O43312 755 aa24.64■■□□□ 1.54
SPTSSA-201ENST00000298130 APOA4P06727 396 aa24.64■■□□□ 1.54
SPTSSA-201ENST00000298130 HCAR3P49019 387 aa24.64■■□□□ 1.54
SPTSSA-201ENST00000298130 CACNB2Q08289 660 aaPredicted RBP24.64■■□□□ 1.54
SPTSSA-201ENST00000298130 CCL14Q16627 93 aa24.64■■□□□ 1.54
SPTSSA-201ENST00000298130 RAB41Q5JT25 222 aa24.64■■□□□ 1.54
SPTSSA-201ENST00000298130 E7ENX8 843 aa24.64■■□□□ 1.53
SPTSSA-201ENST00000298130 AXLP30530 894 aa24.64■■□□□ 1.53
SPTSSA-201ENST00000298130 CLEC6AQ6EIG7 209 aa24.64■■□□□ 1.53
SPTSSA-201ENST00000298130 HMGCLL1Q8TB92 370 aa24.64■■□□□ 1.53
SPTSSA-201ENST00000298130 PDCD6IPQ8WUM4 868 aaKnown RBP24.64■■□□□ 1.53
SPTSSA-201ENST00000298130 GLOD4Q9HC38 313 aa24.64■■□□□ 1.53
SPTSSA-201ENST00000298130 MID2Q9UJV3 735 aa24.64■■□□□ 1.53
SPTSSA-201ENST00000298130 TFAP2AP05549 437 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 SLC12A2P55011 1212 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 MYBPC1Q00872 1141 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 PDAP1Q13442 181 aaKnown RBP24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 GRB14Q14449 540 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 SLC5A9Q2M3M2 681 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 EXT2Q93063 718 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 DMAP1Q9NPF5 467 aaPredicted RBP24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 PLXNB2O15031 1838 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 C9JVG2 144 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 POMCP01189 267 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 ADAM17P78536 824 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 CPSF7Q8N684 471 aaKnown RBP24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 PPHLN1Q8NEY8 458 aaKnown RBP24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 FAM110BQ8TC76 370 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 MS4A4AQ96JQ5 239 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 MRPL46Q9H2W6 279 aaKnown RBP24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 FBXO5Q9UKT4 447 aa24.63■■□□□ 1.53
SPTSSA-201ENST00000298130 RTN3O95197 1032 aaPredicted RBP24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 YWHAQP27348 245 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 XIAPP98170 497 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 SULT2A1Q06520 285 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 PM20D1Q6GTS8 502 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 BTBD9Q96Q07 612 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 VAT1Q99536 393 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 RTP3Q9BQQ7 232 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 FBRSL1Q9HCM7 1045 aaKnown RBP24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 DOCK3Q8IZD9 2030 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 MAFKO60675 156 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 PAGE1O75459 146 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 CLPTM1O96005 669 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 NADK2Q4G0N4 442 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 AGKQ53H12 422 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 DCLRE1AQ6PJP8 1040 aa24.62■■□□□ 1.53
SPTSSA-201ENST00000298130 LINC00523Q86TU6 105 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms