RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 LINC00523Q86TU6 105 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 KBTBD2Q8IY47 623 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 PCSK9Q8NBP7 692 aaKnown RBP11.91□□□□□ -0.5
RHO-201ENST00000296271 GLT1D1Q96MS3 346 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 SERPINB11Q96P15 392 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 FAM193BQ96PV7 902 aaPredicted RBP11.91□□□□□ -0.5
RHO-201ENST00000296271 DCLRE1BQ9H816 532 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
RHO-201ENST00000296271 TREX1Q9NSU2 369 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 NMRK1Q9NWW6 199 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 TLR6Q9Y2C9 796 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 GREB1Q4ZG55 1949 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 A0A0D9SEW6 157 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 A0A1W2PQ45 241 aaPredicted RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 A0A1W2PQY0 241 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 TARM1B6A8C7 271 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 SKAP2O75563 359 aaPredicted RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 ANXA9O76027 345 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 PDHA1P08559 390 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 TSPAN8P19075 237 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 AOC1P19801 751 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 SLC11A1P49279 550 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 CSHL1Q14406 222 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 SNX30Q5VWJ9 437 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 NADSYN1Q6IA69 706 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 EPGNQ6UW88 154 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 PIM3Q86V86 326 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 KLHDC8BQ8IXV7 354 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 PPHLN1Q8NEY8 458 aaKnown RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 HEXDCQ8WVB3 486 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 ANKRD49Q8WVL7 239 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 CYP2S1Q96SQ9 504 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 MARCH5Q9NX47 278 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 HNRNPCL1O60812 293 aaKnown RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 HDCP19113 662 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 GLDCP23378 1020 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 CYP2C18P33260 490 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 GEMP55040 296 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 CCDC6Q16204 474 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 PDCD2Q16342 344 aaPredicted RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 TCHHL1Q5QJ38 904 aaPredicted RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 LRRC8EQ6NSJ5 796 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 TXNDC5Q8NBS9 432 aaKnown RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 OR13J1Q8NGT2 312 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 CFAP61Q8NHU2 1237 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 EXOC2Q96KP1 924 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 RPRD1AQ96P16 312 aaPredicted RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 LENG8Q96PV6 779 aaPredicted RBP11.9□□□□□ -0.5
RHO-201ENST00000296271 TUBB6Q9BUF5 446 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 MARCH2Q9P0N8 246 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 FBXO5Q9UKT4 447 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 PPM1HQ9ULR3 514 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 PCDHB5Q9Y5E4 795 aa11.9□□□□□ -0.5
RHO-201ENST00000296271 GRID2O43424 1007 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 CAPN15O75808 1086 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 TM7SF2O76062 418 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 BMP1P13497 986 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 YWHAQP27348 245 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 KCNC1P48547 511 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 MSLNQ13421 630 aaPredicted RBP11.89□□□□□ -0.51
RHO-201ENST00000296271 CUL3Q13618 768 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 GALNT3Q14435 633 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 CFAP157Q5JU67 520 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 LHX8Q68G74 356 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 NEPROQ6NW34 567 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 ZYG11AQ6WRX3 759 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 TMC7Q7Z402 723 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 PYDC1Q8WXC3 89 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 NAF1Q96HR8 494 aaKnown RBP11.89□□□□□ -0.51
RHO-201ENST00000296271 SCLYQ96I15 445 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 TTC1Q99614 292 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
RHO-201ENST00000296271 DNAJC28Q9NX36 388 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 UXTQ9UBK9 157 aaPredicted RBP11.89□□□□□ -0.51
RHO-201ENST00000296271 CRYL1Q9Y2S2 319 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 ACOT9Q9Y305 439 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 ANKRD12Q6UB98 2062 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 MTMR11A4FU01 709 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 ENPP3O14638 875 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 MT-CO1P00395 513 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 ALOX15P16050 662 aaPredicted RBP11.89□□□□□ -0.51
RHO-201ENST00000296271 STMN1P16949 149 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 RAB10P61026 200 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 FAM189BP81408 668 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
RHO-201ENST00000296271 SIRPB2Q5JXA9 342 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 MARC1Q5VT66 337 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 C1orf146Q5VVC0 180 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 TMEM207Q6UWW9 146 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 RNF111Q6ZNA4 994 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 BEND5Q7L4P6 421 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 TMCO2Q7Z6W1 182 aaPredicted RBP11.89□□□□□ -0.51
RHO-201ENST00000296271 HPS6Q86YV9 775 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 DCP1BQ8IZD4 617 aaKnown RBP11.89□□□□□ -0.51
RHO-201ENST00000296271 OR6P1Q8NGX9 317 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 STYXQ8WUJ0 223 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 IMP4Q96G21 291 aaKnown RBP11.89□□□□□ -0.51
RHO-201ENST00000296271 RSRC1Q96IZ7 334 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms