RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ERBB2P04626 1255 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 CSH1P0DML2 217 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 CSH2P0DML3 217 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 GABRR2P28476 465 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 GRIA1P42261 906 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 ACTR3P61158 418 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 AASDHQ4L235 1098 aaPredicted RBP13.57□□□□□ -0.24
HPS3-201ENST00000296051 SCIMPQ6UWF3 145 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 SLC41A1Q8IVJ1 513 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 ZCCHC7Q8N3Z6 543 aaKnown RBP13.57□□□□□ -0.24
HPS3-201ENST00000296051 ASPSCR1Q9BZE9 553 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 SYBUQ9NX95 663 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 CRYL1Q9Y2S2 319 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 RBMX2Q9Y388 322 aaKnown RBP13.57□□□□□ -0.24
HPS3-201ENST00000296051 MYOCOSA0A1B0GUC4 107 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 TRMUO75648 421 aaKnown RBP13.57□□□□□ -0.24
HPS3-201ENST00000296051 CDH13P55290 713 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 PRMT2P55345 433 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 DUSP4Q13115 394 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 DOK6Q6PKX4 331 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 CASP10Q92851 521 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 EMID1Q96A84 441 aaPredicted RBP13.57□□□□□ -0.24
HPS3-201ENST00000296051 CPNE1Q99829 537 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 ADGRE3Q9BY15 652 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 HPS4Q9NQG7 708 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 TMEM216Q9P0N5 145 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 CARNS1A5YM72 827 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 RGS5O15539 181 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 C2P06681 752 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 PSMB9P28065 219 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 GABRB2P47870 512 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 NAA20P61599 178 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 SLC6A3Q01959 620 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 DLG2Q15700 870 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 LDLRAP1Q5SW96 308 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 ERAP2Q6P179 960 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 GK5Q6ZS86 529 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 GRIN3AQ8TCU5 1115 aa13.57□□□□□ -0.24
HPS3-201ENST00000296051 TRIM45Q9H8W5 580 aaPredicted RBP13.57□□□□□ -0.24
HPS3-201ENST00000296051 LIN28AQ9H9Z2 209 aaKnown RBP13.57□□□□□ -0.24
HPS3-201ENST00000296051 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
HPS3-201ENST00000296051 SLCO1B7G3V0H7 640 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 ZSCAN9O15535 394 aaPredicted RBP13.56□□□□□ -0.24
HPS3-201ENST00000296051 MTA2O94776 668 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 SMPD1P17405 629 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 TRMT11Q7Z4G4 463 aaKnown RBP13.56□□□□□ -0.24
HPS3-201ENST00000296051 TDRPQ86YL5 185 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 EGFL6Q8IUX8 553 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 SEC14L1Q92503 715 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 PANX3Q96QZ0 392 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 MYOCQ99972 504 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 TKTL2Q9H0I9 626 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 NOL6Q9H6R4 1146 aaKnown RBP13.56□□□□□ -0.24
HPS3-201ENST00000296051 TMEM134Q9H6X4 195 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 XPR1Q9UBH6 696 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 AAR2Q9Y312 384 aaKnown RBP13.56□□□□□ -0.24
HPS3-201ENST00000296051 COL1A1P02452 1464 aaPredicted RBP13.56□□□□□ -0.24
HPS3-201ENST00000296051 DSELQ8IZU8 1212 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 ATAD1Q8NBU5 361 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 MID1IP1Q9NPA3 183 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 NSMCE4AQ9NXX6 385 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 WWOXQ9NZC7 414 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 A0A0A0MRY4 1105 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 EFCAB14O75071 495 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 S100A5P33763 92 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 TREML1Q86YW5 311 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 P3H2Q8IVL5 708 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 C12orf56Q8IXR9 622 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 ZNF781Q8N8C0 355 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 PAWRQ96IZ0 340 aaKnown RBP13.56□□□□□ -0.24
HPS3-201ENST00000296051 SPATA13Q96N96 652 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 TBCBQ99426 244 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 TM6SF2Q9BZW4 377 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 ARMC7Q9H6L4 198 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 PLK2Q9NYY3 685 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 SEPT3Q9UH03 358 aa13.56□□□□□ -0.24
HPS3-201ENST00000296051 ZNF862O60290 1169 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 C4BPAP04003 597 aaKnown RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 DARSP14868 501 aaKnown RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 YBX3P16989 372 aaKnown RBP eCLIP13.55□□□□□ -0.24
HPS3-201ENST00000296051 SLC7A2P52569 658 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 IL5RAQ01344 420 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 POU4F1Q01851 419 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 PRKCQQ04759 706 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 TUSC3Q13454 348 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 CARTPTQ16568 116 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 TMEM198Q66K66 360 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 PLD5Q8N7P1 536 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 LNPEPQ9UIQ6 1025 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 NDUFAF1Q9Y375 327 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 SLIT3O75094 1523 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 ITM2AO43736 263 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 ZBTB11O95625 1053 aaPredicted RBP13.55□□□□□ -0.24
HPS3-201ENST00000296051 ITGB6P18564 788 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 GRIK3Q13003 919 aa13.55□□□□□ -0.24
HPS3-201ENST00000296051 CAMK2GQ13555 558 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms