RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 NOD2Q9HC29 1040 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 ZFATQ9P243 1243 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 C2orf16Q68DN1 1984 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 TRIM49D1C9J1S8 452 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 PRPF4O43172 522 aaKnown RBP eCLIP23.11■■□□□ 1.29
PTX3-201ENST00000295927 TMCC1O94876 653 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 ADRA1DP25100 572 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 SERPINB9P50453 376 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 SERPINH1P50454 418 aaKnown RBP23.11■■□□□ 1.29
PTX3-201ENST00000295927 SCNN1BP51168 640 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 SIRPB2Q5JXA9 342 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 VN1R2Q8NFZ6 395 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 IFT43Q96FT9 208 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 FEM1CQ96JP0 617 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 SERAC1Q96JX3 654 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 NSMCE3Q96MG7 304 aa23.11■■□□□ 1.29
PTX3-201ENST00000295927 MRM3Q9HC36 420 aaKnown RBP23.11■■□□□ 1.29
PTX3-201ENST00000295927 KIAA1522Q9P206 1035 aaPredicted RBP23.11■■□□□ 1.29
PTX3-201ENST00000295927 FAM47DPA6NHR8 397 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 KRT38O76015 456 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 ATXN1LP0C7T5 689 aaKnown RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 CDK18Q07002 472 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 LMAN2Q12907 356 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 USP4Q13107 963 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 INO80DQ53TQ3 878 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 PACS1Q6VY07 963 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 TMEM25Q86YD3 366 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 ARID3BQ8IVW6 561 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 KLF6Q99612 283 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 C20orf96Q9NUD7 363 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 PRKAG3Q9UGI9 489 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 SMG5Q9UPR3 1016 aaKnown RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 PSAT1Q9Y617 370 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 ANKRD36A6QL64 1941 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 NUP210Q8TEM1 1887 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 GOLGA8RI6L899 631 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 INSIG1O15503 277 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 TYROBPO43914 113 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 GBP2P32456 591 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 MSLNQ13421 630 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 BMPR2Q13873 1038 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 KCNC3Q14003 757 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 LRRC14Q15048 493 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 SLC14A2Q15849 920 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 COL13A1Q5TAT6 717 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 KCNMB4Q86W47 210 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 RNF135Q8IUD6 432 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 C2orf49Q9BVC5 232 aaPredicted RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 SSU72Q9NP77 194 aaKnown RBP23.1■■□□□ 1.29
PTX3-201ENST00000295927 SCUBE2Q9NQ36 999 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 NKIRAS1Q9NYS0 192 aa23.1■■□□□ 1.29
PTX3-201ENST00000295927 HMX2A2RU54 273 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 PAPLNO95428 1278 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 EPOP01588 193 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 TCF3P15923 654 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 CD70P32970 193 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 SEPT6Q14141 434 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 HSP90AA5PQ58FG0 334 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 ESRP1Q6NXG1 681 aaKnown RBP23.09■■□□□ 1.29
PTX3-201ENST00000295927 MTBPQ96DY7 904 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 NUDCD1Q96RS6 583 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 LINC00597Q9H2U6 94 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 MLXIPLQ9NP71 852 aa23.09■■□□□ 1.29
PTX3-201ENST00000295927 RFXAPO00287 272 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 CES1P23141 567 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 TEDDM1Q5T9Z0 273 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 MROH9Q5TGP6 573 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 RANBP9Q96S59 729 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 AGAP2Q99490 1192 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 SFXN1Q9H9B4 322 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 TBC1D14Q9P2M4 693 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 LHX3Q9UBR4 397 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 LAMA3Q16787 3333 aa23.08■■□□□ 1.29
PTX3-201ENST00000295927 CDH23Q9H251 3354 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 HEATR9A2RTY3 570 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 MT-CO1P00395 513 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 HLA-DPA1P20036 260 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 CA4P22748 312 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 CNTFP26441 200 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 SEC24CP53992 1094 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 SLC18A1P54219 525 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 ARMC3Q5W041 872 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 PDPK2PQ6A1A2 396 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 SH2D5Q6ZV89 423 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 BANPQ8N9N5 519 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 ACDQ96AP0 544 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 ALKBH8Q96BT7 664 aaKnown RBP23.08■■□□□ 1.28
PTX3-201ENST00000295927 LMLNQ96KR4 655 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 TRIB3Q96RU7 358 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 CPNE1Q99829 537 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 EPN3Q9H201 632 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 RABEP2Q9H5N1 569 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 TREX1Q9NSU2 369 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 SLC2A6Q9UGQ3 507 aa23.08■■□□□ 1.28
PTX3-201ENST00000295927 FCF1Q9Y324 198 aaKnown RBP23.08■■□□□ 1.28
PTX3-201ENST00000295927 PENKP01210 267 aaPredicted RBP23.07■■□□□ 1.28
PTX3-201ENST00000295927 FGF1P05230 155 aa23.07■■□□□ 1.28
PTX3-201ENST00000295927 PYGBP11216 843 aa23.07■■□□□ 1.28
PTX3-201ENST00000295927 RPA3P35244 121 aaPredicted RBP23.07■■□□□ 1.28
PTX3-201ENST00000295927 GALNT3Q14435 633 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms