RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FAM228AQ86W67 206 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 KIF2BQ8N4N8 673 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 CAMKK1Q8N5S9 505 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 ARL14EPQ8N8R7 260 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 SNX6Q9UNH7 406 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 A0A0U1RQF3 1178 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 URADA6NGE7 173 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 NRP1O14786 923 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 RPA3P35244 121 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 PURAQ00577 322 aaKnown RBP17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 RASA2Q15283 850 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 PMF1Q6P1K2 205 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 LEMD2Q8NC56 503 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 SELENOMQ8WWX9 145 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 PCDHB18PQ96TA0 734 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 ERVW-1Q9UQF0 538 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 SYN1P17600 705 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 MARCKSL1P49006 195 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 GNA13Q14344 377 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 MIER2Q8N344 545 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 GALNT4Q8N4A0 578 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 OR4L1Q8NH43 312 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 TMEM175Q9BSA9 504 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 TAGLN3Q9UI15 199 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 ZNF682O95780 498 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 TARSP26639 723 aaKnown RBP17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 IL27RAQ6UWB1 636 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 C7orf43Q8WVR3 580 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 VMP1Q96GC9 406 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 EBNA1BP2Q99848 306 aaKnown RBP17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 ANKZF1Q9H8Y5 726 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 UGT2B4P06133 528 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 TRIP4Q15650 581 aaPredicted RBP17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 PFKFB4Q16877 469 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 TEX44Q53QW1 395 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 SYT12Q8IV01 421 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 PRELID2Q8N945 189 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 OR6K2Q8NGY2 324 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 FBXO5Q9UKT4 447 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 TLL2Q9Y6L7 1015 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 GCATO75600 419 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 FAM126BQ8IXS8 530 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 CDK20Q8IZL9 346 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 MAGEH1Q9H213 219 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 RAD21L1Q9H4I0 556 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 UBXN8O00124 270 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 ABCB1P08183 1280 aaPredicted RBP17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 CALB2P22676 271 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 GJA9P57773 515 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 SPIDRQ14159 915 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 NDUFAF1Q9Y375 327 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 NRXN3Q9Y4C0 1643 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 SLC10A3P09131 477 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 TIGD5Q53EQ6 642 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 HDAC7Q8WUI4 952 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 UNC93B1Q9H1C4 597 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 AGO3Q9H9G7 860 aaKnown RBP17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 ZFYVE1Q9HBF4 777 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 MAP10Q9P2G4 905 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 RNASEH2AO75792 299 aaKnown RBP17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 F2P00734 622 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 RANBP1P43487 201 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 MAPKAPK2P49137 400 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 ARHGAP17Q68EM7 881 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 RFWD3Q6PCD5 774 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 IRF2BP1Q8IU81 584 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 PRRG3Q9BZD7 231 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 KLQ9UEF7 1012 aa17.85■□□□□ 0.45
CDC42EP3-201ENST00000295324 TPP1O14773 563 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 L1CAMP32004 1257 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 MC4RP32245 332 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 ATP6V0D1P61421 351 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 SLC20A2Q08357 652 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 TEX9Q8N6V9 391 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 HDAC10Q969S8 669 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 CAAP1Q9H8G2 361 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 ASF1AQ9Y294 204 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 ISM1B1AKI9 464 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 NTSP30990 170 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 CAP1Q01518 475 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 PLOD1Q02809 727 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 GNA12Q03113 381 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 USP7Q93009 1102 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 PGM2Q96G03 612 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 DPEP3Q9H4B8 488 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 CHKBQ9Y259 395 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 C5orf60A6NFR6 353 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 EIF2S1P05198 315 aaKnown RBP17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 H2AFXP16104 143 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 S100A3P33764 101 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 WASP42768 502 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 ABCG1P45844 678 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 DAOAP59103 153 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 PRMT9Q6P2P2 845 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 TRIM69Q86WT6 500 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 RHBGQ9H310 441 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 PALMDQ9NP74 551 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 ARHGEF4Q9NR80 690 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 ZNF536O15090 1300 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 A0A1W2PQ45 241 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms