RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 TCF4P15884 667 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 SNRPD1P62314 119 aaKnown RBP12.54□□□□□ -0.4
SLX4-201ENST00000294008 GXYLT1Q4G148 440 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 BOLA3Q53S33 107 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 KCNMB4Q86W47 210 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 PHYKPLQ8IUZ5 450 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 TERB1Q8NA31 727 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 ATP8B4Q8TF62 1192 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 CKAP2Q8WWK9 683 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 SGSM3Q96HU1 749 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 SLC27A5Q9Y2P5 690 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 G3V2T6 193 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 SIN3BO75182 1162 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 VIPP01282 170 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 CXCL8P10145 99 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 HDCP19113 662 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 VBP1P61758 197 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 PIK3R6Q5UE93 754 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 DHFR2Q86XF0 187 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 CLVS1Q8IUQ0 354 aaPredicted RBP12.54□□□□□ -0.4
SLX4-201ENST00000294008 ZNF276Q8N554 614 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 GPR152Q8TDT2 470 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 ZNF558Q96NG5 402 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 TMLHEQ9NVH6 421 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 PCDHGB5Q9Y5G0 923 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 DNMBPQ6XZF7 1577 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 LOC102724159A0A0B4J2E5 919 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 A8MU76 341 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 RNASEH2AO75792 299 aaKnown RBP12.54□□□□□ -0.4
SLX4-201ENST00000294008 CDH3P22223 829 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 RXRGP48443 463 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 PWP2Q15269 919 aaKnown RBP12.54□□□□□ -0.4
SLX4-201ENST00000294008 MAPK14Q16539 360 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 NFE2Q16621 373 aaPredicted RBP12.54□□□□□ -0.4
SLX4-201ENST00000294008 PABPC1LQ4VXU2 614 aaKnown RBP12.54□□□□□ -0.4
SLX4-201ENST00000294008 PHF10Q8WUB8 498 aaKnown RBP12.54□□□□□ -0.4
SLX4-201ENST00000294008 ENOPH1Q9UHY7 261 aa12.54□□□□□ -0.4
SLX4-201ENST00000294008 VAPBO95292 243 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CXCL14O95715 111 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CATP04040 527 aaKnown RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 FCGR1AP12314 374 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 MGAT1P26572 445 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 SLC1A6P48664 564 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 SOX10P56693 466 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ENPEPQ07075 957 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 MFSD10Q14728 455 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ZNF484Q5JVG2 852 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 OGFRL1Q5TC84 451 aaPredicted RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ZYG11AQ6WRX3 759 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 APTXQ7Z2E3 356 aaKnown RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 OR6K2Q8NGY2 324 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 TBC1D16Q8TBP0 767 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 VCPKMTQ9H867 229 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 TRMT13Q9NUP7 481 aaKnown RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 PPP1R14DQ9NXH3 145 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 TELO2Q9Y4R8 837 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 PIK3C2GO75747 1445 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 GPR89AB7ZAQ6 455 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 C9P02748 559 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 GPR89BP0CG08 455 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 VDRP11473 427 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CYP4B1P13584 511 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 SLC6A9P48067 706 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 THAP5Q7Z6K1 395 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CCDC120Q96HB5 630 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ANO9A1A5B4 782 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ETS1P14921 441 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 COILP38432 576 aaPredicted RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 GMFBP60983 142 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CBX2Q14781 532 aaPredicted RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 FNBP1LQ5T0N5 605 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 DEFB119Q8N690 84 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 EPS8L3Q8TE67 593 aaKnown RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 TCEAL3Q969E4 200 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 COX4I2Q96KJ9 171 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 GJD4Q96KN9 370 aaPredicted RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 TMEM168Q9H0V1 697 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CROTQ9UKG9 612 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 SLC9A3R1O14745 358 aaPredicted RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 CLPTM1O96005 669 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 VIL1P09327 827 aaKnown RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 TSPAN8P19075 237 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ACLYP53396 1101 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 GRIK4Q16099 956 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CYP27C1Q4G0S4 372 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 DHRSXQ8N5I4 330 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ZCCHC10Q8TBK6 192 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 DDX3XO00571 662 aaKnown RBP eCLIP12.53□□□□□ -0.4
SLX4-201ENST00000294008 LDLRP01130 860 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ACADSP16219 412 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ECHS1P30084 290 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 MAT2AP31153 395 aaKnown RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 MAGEA2P43356 314 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 SCNN1GP51170 649 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 QPRTQ15274 297 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 ABCA11PQ4W5N1 156 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 PAGE2Q7Z2X7 111 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms