RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SPAG4Q9NPE6 437 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 TMEM216Q9P0N5 145 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 SCAF8Q9UPN6 1271 aaKnown RBP10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 CRYL1Q9Y2S2 319 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 CRYBG1Q9Y4K1 1723 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 LRRC14BA6NHZ5 514 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 ALOX5P09917 674 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 PRKAR1AP10644 381 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 MYL4P12829 197 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 NELFEP18615 380 aaKnown RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 MAGP20916 626 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 PIK3CGP48736 1102 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 GALK1P51570 392 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 DPYSL3Q14195 570 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 HLA-DQA1Q5Y7H0 255 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 RETSATQ6NUM9 610 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 CHPFQ8IZ52 775 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 DEPDC4Q8N2C3 294 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 OSBPL11Q9BXB4 747 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 RSPH9Q9H1X1 276 aaPredicted RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 CLK4Q9HAZ1 481 aaKnown RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 XPNPEP3Q9NQH7 507 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 FBXO28Q9NVF7 368 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 MCUBQ9NWR8 336 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 TSPAN16Q9UKR8 245 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 CHURC1-FNTBB4DL54 471 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 RNASEH1O60930 286 aaKnown RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 ZBTB11O95625 1053 aaPredicted RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 ZSCAN5DPP0CG00 497 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 HOXB8P17481 243 aaPredicted RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 RBL1P28749 1068 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 BST1Q10588 318 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 GRIK5Q16478 980 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 PFKFB4Q16877 469 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 EMC10Q5UCC4 262 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 RAPGEFL1Q9UHV5 662 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 MTF2Q9Y483 593 aaPredicted RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 PPP2R3BQ9Y5P8 575 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 RGSL1A5PLK6 1076 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 KPNA5O15131 536 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 CHRNGP07510 517 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 FMO4P31512 558 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 NR2C2P49116 596 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 IL18R1Q13478 541 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 TAF13Q15543 124 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 NEPROQ6NW34 567 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 GCNT7Q6ZNI0 430 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 FAR1Q8WVX9 515 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 SELENOMQ8WWX9 145 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 BAP1Q92560 729 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 KAT5Q92993 513 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 REPS1Q96D71 796 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 VCPIP1Q96JH7 1222 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 CCDC59Q9P031 241 aaKnown RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 RPS6KA6Q9UK32 745 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 DSEQ9UL01 958 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 PCDHB7Q9Y5E2 793 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 UMODL1Q5DID0 1318 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 A0A087WZ62 844 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 FAM92AA1XBS5 289 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 EGFRP00533 1210 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 SHBGP04278 402 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 CTXN3Q4LDR2 81 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 PLET1Q6UQ28 207 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 MCFD2Q8NI22 146 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 MBOAT7Q96N66 472 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 TCF12Q99081 682 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 RACGAP1Q9H0H5 632 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 ALG9Q9H6U8 611 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 SLC35C2Q9NQQ7 365 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 ARL15Q9NXU5 204 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 LEF1Q9UJU2 399 aaPredicted RBP10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 ZNF112Q9UJU3 913 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 FAM50BQ9Y247 325 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 GAKO14976 1311 aa10.83□□□□□ -0.68
PKNOX1-201ENST00000291547 APOC4-APOC2K7ER74 178 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 APOC2P02655 101 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 FGRP09769 529 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 FOSL2P15408 326 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 PRKAG1P54619 331 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 MAPKAPK3Q16644 382 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 APOBEC3HQ6NTF7 200 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 RNF44Q7L0R7 432 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 OR52L1Q8NGH7 329 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 MTFMTQ96DP5 389 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 SLC4A5Q9BY07 1137 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 WDR12Q9GZL7 423 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 GIN1Q9NXP7 522 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 TDRKHQ9Y2W6 561 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 RBMX2Q9Y388 322 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 CCNKO75909 580 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 ASLP04424 464 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 LYNP07948 512 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 OR56A5P0C7T3 313 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 NFKB1P19838 968 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 LHX1P48742 406 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 GMFBP60983 142 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 MTAPQ13126 283 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 CRY1Q16526 586 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms