RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 FUT11Q495W5 492 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 SPDYCQ5MJ68 293 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 IL31Q6EBC2 164 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 HIBCHQ6NVY1 386 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 PPIL6Q8IXY8 311 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 ATP11CQ8NB49 1132 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 IFT43Q96FT9 208 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 MGME1Q9BQP7 344 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 TRIM56Q9BRZ2 755 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 LINC00597Q9H2U6 94 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 SEPT3Q9UH03 358 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 CLCA2Q9UQC9 943 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 SEC31AO94979 1220 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 MMP13P45452 471 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 DGKGP49619 791 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 PFKPQ01813 784 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 ZBTB17Q13105 803 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 MPP3Q13368 585 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 ZNF235Q14590 738 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 KCNJ11Q14654 390 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 GRM3Q14832 879 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 ARHGAP36Q6ZRI8 547 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 TPGS1Q6ZTW0 290 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 TAS2R42Q7RTR8 314 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 ZNF567Q8N184 647 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 VPS45Q9NRW7 570 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 RSPH14Q9UHP6 348 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 CDH22Q9UJ99 828 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 VPS28Q9UK41 221 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 A0A0D9SEW6 157 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 EIF3HO15372 352 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 RPL22P35268 128 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 TNFRSF4P43489 277 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 SERPINH1P50454 418 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 SETDB1Q15047 1291 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 BRD3Q15059 726 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 RNASEH2BQ5TBB1 312 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 CFAP61Q8NHU2 1237 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 MAFAQ8NHW3 353 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 SLC25A51Q9H1U9 297 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 GRHL1Q9NZI5 618 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 AAR2Q9Y312 384 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 C19orf67A6NJJ6 358 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 ANXA9O76027 345 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 ARSAP15289 507 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 ACVRL1P37023 503 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 KCNJ1P48048 391 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 ARF5P84085 180 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 FSCBQ5H9T9 825 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 HP1BP3Q5SSJ5 553 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 MARC1Q5VT66 337 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 RALGPS2Q86X27 583 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 RELL1Q8IUW5 271 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 ADHFE1Q8IWW8 467 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 OR52K2Q8NGK3 314 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 WFDC5Q8TCV5 224 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 CSGALNACT1Q8TDX6 532 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 CDKL2Q92772 493 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 AGAP3Q96P47 875 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 PSKH2Q96QS6 385 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 FAM118BQ9BPY3 351 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 TRIM51Q9BSJ1 452 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 BAG5Q9UL15 447 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 H3BQ06 376 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 MLNP12872 115 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 HLA-FP30511 346 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 AKT1P31749 480 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 CD70P32970 193 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 CSE1LP55060 971 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 USP33Q8TEY7 942 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 TUBGCP5Q96RT8 1024 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 CINPQ9BW66 212 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 POLR1EQ9GZS1 481 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 RAB23Q9ULC3 237 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 STARD13Q9Y3M8 1113 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 MIA3Q5JRA6 1907 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 OPA1O60313 960 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 GDI1P31150 447 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 RPL21P46778 160 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 GEMP55040 296 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 SYCP2LQ5T4T6 812 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 ADIPOR2Q86V24 386 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 TP53INP2Q8IXH6 220 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 OR7D4Q8NG98 312 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 HCAR2Q8TDS4 363 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 HNRNPLLQ8WVV9 542 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 PNKPQ96T60 521 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 LRRC40Q9H9A6 602 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 GLOD4Q9HC38 313 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 ZDHHC18Q9NUE0 388 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 VPS51Q9UID3 782 aa8.54□□□□□ -1.04
PTPDC1-201ENST00000288976 ATP9BO43861 1147 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CPP00450 1065 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 C7P10643 843 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 POLR2EP19388 210 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 GJA4P35212 333 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 OPRD1P41143 372 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 GRIA2P42262 883 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 GUCY2DQ02846 1103 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms