RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SLC10A4Q96EP9 437 aa10.5□□□□□ -0.73
SKA1-201ENST00000285116 RMND5BQ96G75 393 aaPredicted RBP10.5□□□□□ -0.73
SKA1-201ENST00000285116 ABHD8Q96I13 439 aa10.5□□□□□ -0.73
SKA1-201ENST00000285116 AGAP3Q96P47 875 aa10.5□□□□□ -0.73
SKA1-201ENST00000285116 PPP1R16BQ96T49 567 aa10.5□□□□□ -0.73
SKA1-201ENST00000285116 MLPHQ9BV36 600 aaPredicted RBP10.5□□□□□ -0.73
SKA1-201ENST00000285116 CAAP1Q9H8G2 361 aa10.5□□□□□ -0.73
SKA1-201ENST00000285116 MAN1C1Q9NR34 630 aa10.5□□□□□ -0.73
SKA1-201ENST00000285116 DDHD2O94830 711 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 EPHA3P29320 983 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 ADRA1BP35368 520 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 UGP2Q16851 508 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 SV2CQ496J9 727 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 NOTUMQ6P988 496 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 CHSY3Q70JA7 882 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 PID1Q7Z2X4 250 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 GPR141Q7Z602 305 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 LINC00523Q86TU6 105 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 ZC3HC1Q86WB0 502 aaKnown RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 TNS4Q8IZW8 715 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 GTF3C2Q8WUA4 911 aaPredicted RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 ZNF512Q96ME7 567 aaPredicted RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 PPP1R2P1Q96PQ5 205 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 YIPF2Q9BWQ6 316 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 SNX25Q9H3E2 840 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 EFCAB1Q9HAE3 211 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 KLHL8Q9P2G9 620 aaPredicted RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 SUCOQ9UBS9 1254 aaKnown RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 CDYLQ9Y232 598 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 PATJQ8NI35 1801 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 C7orf72A4D263 438 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 RNASEH2AO75792 299 aaKnown RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 TFEBP19484 476 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 ADORA2BP29275 332 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 CD68P34810 354 aaPredicted RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 NDST2P52849 883 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 IGBP1P78318 339 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 IRF9Q00978 393 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 SLC12A1Q13621 1099 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 ZNF829Q3KNS6 432 aaPredicted RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 GPR180Q86V85 440 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 PIGZQ86VD9 579 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 ERO1BQ86YB8 467 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 LSMEM2Q8N112 164 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 PELI3Q8N2H9 469 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 ZSCAN18Q8TBC5 510 aaPredicted RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 SLC2A14Q8TDB8 520 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 ITPKCQ96DU7 683 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 FAR2Q96K12 515 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 KLHL32Q96NJ5 620 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 UHRF1Q96T88 793 aaPredicted RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 CLK4Q9HAZ1 481 aaKnown RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 PDGFCQ9NRA1 345 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 TUBA8Q9NY65 449 aaPredicted RBP10.49□□□□□ -0.73
SKA1-201ENST00000285116 SNTG2Q9NY99 539 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 CDH7Q9ULB5 785 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 SLC8A2Q9UPR5 921 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 NRCAMQ92823 1304 aa10.49□□□□□ -0.73
SKA1-201ENST00000285116 TRPC5OSA6NMA1 111 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 LTFP02788 710 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 ALDH2P05091 517 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 NPR3P17342 541 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 FUT4P22083 530 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 MPSTP25325 297 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 GRIA4P48058 902 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 PKNOX1P55347 436 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 TRAP1Q12931 704 aaKnown RBP10.48□□□□□ -0.73
SKA1-201ENST00000285116 IKBKEQ14164 716 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 TGFBIQ15582 683 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 GRIK4Q16099 956 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 NAPEPLDQ6IQ20 393 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 ARMCX2Q7L311 632 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 B3GALNT2Q8NCR0 500 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 APPL2Q8NEU8 664 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 ISOC1Q96CN7 298 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 AGAP2Q99490 1192 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 KATNBL1Q9H079 304 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 COQ10BQ9H8M1 238 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 WDR6Q9NNW5 1121 aaKnown RBP10.48□□□□□ -0.73
SKA1-201ENST00000285116 OLAHQ9NV23 265 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 FBXW11Q9UKB1 542 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 COQ6Q9Y2Z9 468 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 FUOMA2VDF0 154 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 TMEM247A6NEH6 219 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 RRN3P2A6NIE6 340 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 CFLARO15519 480 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 GPR32O75388 356 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 TKTP29401 623 aaKnown RBP10.48□□□□□ -0.73
SKA1-201ENST00000285116 MSX2P35548 267 aaPredicted RBP10.48□□□□□ -0.73
SKA1-201ENST00000285116 TAF6P49848 677 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 CCR3P51677 355 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 ADIGQ0VDE8 80 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 CDH17Q12864 832 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 PSMD5Q16401 504 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 NRF1Q16656 503 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 ZNF792Q3KQV3 632 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 ZBED5Q49AG3 693 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 HACD2Q6Y1H2 254 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 CLVS1Q8IUQ0 354 aaPredicted RBP10.48□□□□□ -0.73
SKA1-201ENST00000285116 CCNYQ8ND76 341 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms