RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CSF2P04141 144 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 CYP1A1P04798 512 aaPredicted RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 CELA2BP08218 269 aaPredicted RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 UCHL3P15374 230 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 NME1P15531 152 aaKnown RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 TGM2P21980 687 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 AKT2P31751 481 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 L1CAMP32004 1257 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 GMPRP36959 345 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 MTIF2P46199 727 aaKnown RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 MMP16P51512 607 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 NEK3P51956 506 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 PFN3P60673 137 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 SKOR1P84550 965 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 FMO1Q01740 532 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 GNA12Q03113 381 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 RAPGEF1Q13905 1077 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 CCDC14Q49A88 953 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 CARD16Q5EG05 197 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 LRRC73Q5JTD7 316 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 PERM1Q5SV97 790 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 NAA35Q5VZE5 725 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 KCTD16Q68DU8 428 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 SMYD5Q6GMV2 418 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 GUSBP11Q6P575 273 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 LEKR1Q6ZMV7 388 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 PTAR1Q7Z6K3 402 aaPredicted RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 PHLDB2Q86SQ0 1253 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 DRC7Q8IY82 874 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 RBFAQ8N0V3 343 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 ZNF843Q8N446 348 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 PCDH20Q8N6Y1 951 aaKnown RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 CCDC185Q8N715 623 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 TMEM35BQ8NCS4 154 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 PCDHB18PQ96TA0 734 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 SPON2Q9BUD6 331 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 C1QTNF2Q9BXJ5 285 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 KRTAP4-6Q9BYQ5 205 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 SLC17A9Q9BYT1 436 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 SEMA4CQ9C0C4 833 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 ZYG11BQ9C0D3 744 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 CEP44Q9C0F1 390 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 SYNCQ9H7C4 482 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 ATP13A1Q9HD20 1204 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 METTL5Q9NRN9 209 aaKnown RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 SAMSN1Q9NSI8 373 aaKnown RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 PPARGC1AQ9UBK2 798 aaKnown RBP9.11□□□□□ -0.95
TPM3-201ENST00000271850 STAP1Q9ULZ2 295 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 HS3ST3A1Q9Y663 406 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 A6NNZ2 444 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 AREL1O15033 823 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 AP1G1O43747 822 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 CSO75390 466 aaKnown RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 GCATO75600 419 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 DXOO77932 396 aaKnown RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 LRIG2O94898 1065 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 F9P00740 461 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 IGFALSP35858 605 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 HDAC4P56524 1084 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 UBE2HP62256 183 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 DAB2P98082 770 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 ATP11AP98196 1134 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 NRG1Q02297 640 aaPredicted RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 MTA1Q13330 715 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 ATXN7L2Q5T6C5 722 aaPredicted RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 KIAA1161Q6NSJ0 714 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 CRTC1Q6UUV9 634 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 ZNF783Q6ZMS7 281 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 ARCQ7LC44 396 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 PYROXD2Q8N2H3 581 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 MLKLQ8NB16 471 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 IFI44Q8TCB0 444 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 GPT2Q8TD30 523 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 RXFP2Q8WXD0 754 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 BAP1Q92560 729 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 CENPIQ92674 756 aaPredicted RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 ARHGEF2Q92974 986 aaKnown RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 CENPTQ96BT3 561 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 IFT43Q96FT9 208 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 NAF1Q96HR8 494 aaKnown RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 LENG8Q96PV6 779 aaPredicted RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 PPP1R9BQ96SB3 815 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 HEPHQ9BQS7 1158 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 TUBGCP2Q9BSJ2 902 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 ZDHHC6Q9H6R6 413 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 CPNE5Q9HCH3 593 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 MBNL1Q9NR56 388 aaKnown RBP9.1□□□□□ -0.95
TPM3-201ENST00000271850 DNAJC28Q9NX36 388 aa9.1□□□□□ -0.95
TPM3-201ENST00000271850 LRP4O75096 1905 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 BOD1L1Q8NFC6 3051 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 LRRK1Q38SD2 2015 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 TCRBV5S1A1TA0A578 114 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 C2CD4BA6NLJ0 364 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 C16orf96A6NNT2 1141 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 INSIG1O15503 277 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 USP12O75317 370 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 LSM8O95777 96 aaKnown RBP9.09□□□□□ -0.95
TPM3-201ENST00000271850 GP1BAP07359 652 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 PRKCSHP14314 528 aaPredicted RBP9.09□□□□□ -0.95
TPM3-201ENST00000271850 PLA2G2AP14555 144 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms