RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 SLC1A5Q15758 541 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 PCSK7Q16549 785 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 PKN3Q6P5Z2 889 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 ZNF771Q7L3S4 317 aaPredicted RBP14.27□□□□□ -0.12
SS18-201ENST00000269137 TAOK1Q7L7X3 1001 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 EXOC3L1Q86VI1 746 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 SLC26A11Q86WA9 606 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 OSCP1Q8WVF1 389 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 RSPRY1Q96DX4 576 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 FCRL3Q96P31 734 aaPredicted RBP14.27□□□□□ -0.12
SS18-201ENST00000269137 SLC2A11Q9BYW1 496 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 ABCB8Q9NUT2 735 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 LHX3Q9UBR4 397 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 TBK1Q9UHD2 729 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 ZNF180Q9UJW8 692 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 ARIH1Q9Y4X5 557 aaPredicted RBP14.27□□□□□ -0.12
SS18-201ENST00000269137 ACTL7BQ9Y614 415 aa14.27□□□□□ -0.12
SS18-201ENST00000269137 ZCWPW2A0A1B0GU75 182 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 TTC24A2A3L6 582 aaPredicted RBP14.27□□□□□ -0.13
SS18-201ENST00000269137 INHBAP08476 426 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.13
SS18-201ENST00000269137 HLA-DPA1P20036 260 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 ADRA1DP25100 572 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 VIPR2P41587 438 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 CHRNA4P43681 627 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
SS18-201ENST00000269137 SCNN1BP51168 640 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 PPP2R2AP63151 447 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 MSLNQ13421 630 aaPredicted RBP14.27□□□□□ -0.13
SS18-201ENST00000269137 DMC1Q14565 340 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 TMED2Q15363 201 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 SKIDA1Q1XH10 827 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 CNPY4Q8N129 248 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 TRIB3Q96RU7 358 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 RANBP9Q96S59 729 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 CHRAC1Q9NRG0 131 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 SMYD2Q9NRG4 433 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 DUS2Q9NX74 493 aaKnown RBP14.27□□□□□ -0.13
SS18-201ENST00000269137 PRKAG3Q9UGI9 489 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 IKBKGQ9Y6K9 419 aa14.27□□□□□ -0.13
SS18-201ENST00000269137 CXorf49A8MYA2 514 aaPredicted RBP14.26□□□□□ -0.13
SS18-201ENST00000269137 GJB3O75712 270 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 PIAS1O75925 651 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 MT-CO1P00395 513 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 FGF1P05230 155 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 HPDP32754 393 aaPredicted RBP14.26□□□□□ -0.13
SS18-201ENST00000269137 MGAT5Q09328 741 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 POU6F1Q14863 301 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 DHCR24Q15392 516 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 EML3Q32P44 896 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 PITRM1Q5JRX3 1037 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 SIRPB2Q5JXA9 342 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 ATAT1Q5SQI0 421 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
SS18-201ENST00000269137 GET4Q7L5D6 327 aaPredicted RBP14.26□□□□□ -0.13
SS18-201ENST00000269137 KDELC2Q7Z4H8 507 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 KIAA0907Q7Z7F0 614 aaPredicted RBP14.26□□□□□ -0.13
SS18-201ENST00000269137 TRABD2AQ86V40 505 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 PPM1NQ8N819 430 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.26□□□□□ -0.13
SS18-201ENST00000269137 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
SS18-201ENST00000269137 PPHLN1Q8NEY8 458 aaKnown RBP14.26□□□□□ -0.13
SS18-201ENST00000269137 BPIFB1Q8TDL5 484 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 CDKL2Q92772 493 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 ZNF669Q96BR6 464 aaPredicted RBP14.26□□□□□ -0.13
SS18-201ENST00000269137 IFT43Q96FT9 208 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 APOL5Q9BWW9 433 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 SENP1Q9P0U3 644 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 FBXO10Q9UK96 956 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 CDH7Q9ULB5 785 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 TCAF1Q9Y4C2 921 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 DOCK8Q8NF50 2099 aa14.26□□□□□ -0.13
SS18-201ENST00000269137 HOXC11O43248 304 aaPredicted RBP14.25□□□□□ -0.13
SS18-201ENST00000269137 NDST3O95803 873 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 PABPC1P11940 636 aaKnown RBP14.25□□□□□ -0.13
SS18-201ENST00000269137 CSNK1DP48730 415 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 RHOAP61586 193 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 SULT2A1Q06520 285 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 NCEH1Q6PIU2 408 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 CES3Q6UWW8 571 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 CHRDL2Q6WN34 429 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 MARK2Q7KZI7 788 aaKnown RBP14.25□□□□□ -0.13
SS18-201ENST00000269137 CTAGE3PQ8IX95 158 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 SLC25A41Q8N5S1 370 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 MRRFQ96E11 262 aaKnown RBP14.25□□□□□ -0.13
SS18-201ENST00000269137 MFSD3Q96ES6 412 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 CERS2Q96G23 380 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 NSMCE3Q96MG7 304 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 S1PR5Q9H228 398 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 CNOT10Q9H9A5 744 aaKnown RBP14.25□□□□□ -0.13
SS18-201ENST00000269137 CLEC1BQ9P126 229 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 GGA2Q9UJY4 613 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 HS3ST2Q9Y278 367 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 HEATR9A2RTY3 570 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 ADH1CP00326 375 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 CYP17A1P05093 508 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 ALADP13716 330 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 NMBRP28336 390 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 AP1S1P61966 158 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms