RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 DTNAQ9Y4J8 743 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 SNX10Q9Y5X0 201 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 MAD1L1Q9Y6D9 718 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 ARHGAP10A1A4S6 786 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 SDR42E2A6NKP2 422 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 MAP3K6O95382 1288 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 GLUD1P00367 558 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 NUMBP49757 651 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 OTUD1Q5VV17 481 aaPredicted RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 CES4AQ5XG92 561 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 PM20D1Q6GTS8 502 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 TAC4Q86UU9 113 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 PDIK1LQ8N165 341 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 CCDC33Q8N5R6 958 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 SLC35B2Q8TB61 432 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 DQX1Q8TE96 717 aaKnown RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 RNF139Q8WU17 664 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 SNRNP27Q8WVK2 155 aaKnown RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 CASP10Q92851 521 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 GFM2Q969S9 779 aaKnown RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 EMILIN2Q9BXX0 1053 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 MARCOQ9UEW3 520 aaPredicted RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 SH3GLB1Q9Y371 365 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 hCG_1818297A0A087WSY0 165 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 TMEM221A6NGB7 291 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 TRUB2O95900 331 aaKnown RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 PMLP29590 882 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 NOS2P35228 1153 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 SERPINB6P35237 376 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 CLCN2P51788 898 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 CHI3L2Q15782 390 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 RALGPS1Q5JS13 557 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 OGFRL1Q5TC84 451 aaPredicted RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 TPGS2Q68CL5 300 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 DNAJB7Q7Z6W7 309 aaPredicted RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 C12orf76Q8N812 135 aaPredicted RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 CEP70Q8NHQ1 597 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 GRIP2Q9C0E4 1043 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 NACA2Q9H009 215 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 DHX35Q9H5Z1 703 aaKnown RBP12.81□□□□□ -0.36
PRPF6-201ENST00000266079 PNPLA8Q9NP80 782 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 HCFC1R1Q9NWW0 138 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 SIRPGQ9P1W8 387 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 A0A0C4DFX4 3053 aa12.81□□□□□ -0.36
PRPF6-201ENST00000266079 DAB1O75553 588 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 SLC25A11Q02978 314 aaKnown RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 BTKQ06187 659 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 WASHC5Q12768 1159 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 MTM1Q13496 603 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 HADHQ16836 314 aaKnown RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 SLC25A52Q3SY17 297 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 TEX44Q53QW1 395 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 C10orf120Q5SQS8 335 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 ST13P5Q8NFI4 369 aaPredicted RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 FNIP1Q8TF40 1166 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 FBXO44Q9H4M3 255 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 TRPC7Q9HCX4 862 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 UBAP1Q9NZ09 502 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 STAP1Q9ULZ2 295 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 PLLPQ9Y342 182 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 HBS1LQ9Y450 684 aaKnown RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 TCRBV7S3A2A0A539 114 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 CAPN8A6NHC0 703 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 TMEM63AO94886 807 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 LRG1P02750 347 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 PCSK6P29122 969 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 PTPN7P35236 360 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 NRIP1P48552 1158 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 CDH6P55285 790 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 ERVK-21P61565 698 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 PLOD1Q02809 727 aaPredicted RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 VEPH1Q14D04 833 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 KBTBD12Q3ZCT8 623 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 RABGAP1LQ5R372 815 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 NUDCD3Q8IVD9 361 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 KCTD6Q8NC69 237 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 EBF4Q9BQW3 602 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 CORO1BQ9BR76 489 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 SIK2Q9H0K1 926 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 Q9H521 79 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 ANLNQ9NQW6 1124 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 MAN1C1Q9NR34 630 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 SMPD4Q9NXE4 827 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 SAE1Q9UBE0 346 aaPredicted RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 CDH22Q9UJ99 828 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 RWDD3Q9Y3V2 267 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 TCRBV9S1A1TA0A576 114 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 TRIM49D1C9J1S8 452 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 NRG2O14511 850 aaPredicted RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 MAGEB3O15480 346 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 DNAJA2O60884 412 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 PDE5AO76074 875 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 SORBS2O94875 1100 aaKnown RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
PRPF6-201ENST00000266079 SMARCB1Q12824 385 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 TFDP3Q5H9I0 405 aa12.8□□□□□ -0.36
PRPF6-201ENST00000266079 LRRC38Q5VT99 294 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms