RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 KNTC1P50748 2209 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 APC2O95996 2303 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 ZSCAN5CA6NGD5 496 aaPredicted RBP9.88□□□□□ -0.83
VPS41-201ENST00000265745 WASH4PA8MWX3 477 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 TEX33O43247 280 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 CCP110O43303 1012 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 TSPAN6O43657 245 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 SIGLEC6O43699 453 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 SDC3O75056 442 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 GSRP00390 522 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 JUPP14923 745 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 FERP16591 822 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 DGKAP23743 735 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 EPHB2P29323 1055 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 AIF1P55008 147 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 OGDHQ02218 1023 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 CYP4F3Q08477 520 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 ZNF211Q13398 564 aaPredicted RBP9.88□□□□□ -0.83
VPS41-201ENST00000265745 ILKQ13418 452 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 MAMLD1Q13495 774 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 EFHC2Q5JST6 749 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 KIAA1161Q6NSJ0 714 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 DNAJC24Q6P3W2 148 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 SCYL2Q6P3W7 929 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 ADGRD1Q6QNK2 874 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 LEKR1Q6ZMV7 388 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 GCNT7Q6ZNI0 430 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 Q6ZSR6 202 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 PARS2Q7L3T8 475 aaKnown RBP9.88□□□□□ -0.83
VPS41-201ENST00000265745 SLC22A18ASQ8N1D0 253 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 AOPEPQ8N6M6 819 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 RTL3Q8N8U3 475 aaKnown RBP9.88□□□□□ -0.83
VPS41-201ENST00000265745 OR6K2Q8NGY2 324 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 FAM174AQ8TBP5 190 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 BAP1Q92560 729 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 VCPIP1Q96JH7 1222 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 MCEEQ96PE7 176 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 LENG8Q96PV6 779 aaPredicted RBP9.88□□□□□ -0.83
VPS41-201ENST00000265745 C1QTNF2Q9BXJ5 285 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 NAT10Q9H0A0 1025 aaKnown RBP9.88□□□□□ -0.83
VPS41-201ENST00000265745 ZDHHC6Q9H6R6 413 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 UCKL1Q9NWZ5 548 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 TAS2R14Q9NYV8 317 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 TMEM63CQ9P1W3 806 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 FZD10Q9ULW2 581 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 MYO6Q9UM54 1294 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 GPSM3Q9Y4H4 160 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 FAM208BQ5VWN6 2430 aa9.88□□□□□ -0.83
VPS41-201ENST00000265745 ANKRD11Q6UB99 2663 aaPredicted RBP9.87□□□□□ -0.83
VPS41-201ENST00000265745 WDFY3Q8IZQ1 3526 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 POM121BA6NF01 834 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 IGLON5A6NGN9 336 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 KRIT1O00522 736 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 AREL1O15033 823 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 RAD51BO15315 384 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 BUB1O43683 1085 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 CREB3O43889 395 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 PIAS2O75928 621 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 UGT2B4P06133 528 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 GIMD1P0DJR0 217 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 JUNDP17535 347 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 TNFAIP3P21580 790 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 CLDN6P56747 220 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 YBEYP58557 167 aaPredicted RBP9.87□□□□□ -0.83
VPS41-201ENST00000265745 SNRPD1P62314 119 aaKnown RBP9.87□□□□□ -0.83
VPS41-201ENST00000265745 SGCGQ13326 291 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 ANO6Q4KMQ2 910 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 INO80DQ53TQ3 878 aaPredicted RBP9.87□□□□□ -0.83
VPS41-201ENST00000265745 ATXN7L2Q5T6C5 722 aaPredicted RBP9.87□□□□□ -0.83
VPS41-201ENST00000265745 DCUN1D2Q6PH85 259 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 ZSCAN30Q86W11 494 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 DCP2Q8IU60 420 aaKnown RBP9.87□□□□□ -0.83
VPS41-201ENST00000265745 UMODL1-AS1Q8N2C9 162 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 RYBPQ8N488 228 aaPredicted RBP9.87□□□□□ -0.83
VPS41-201ENST00000265745 OR4C6Q8NH72 309 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 CASKIN2Q8WXE0 1202 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 ASB12Q8WXK4 309 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 RAB7BQ96AH8 199 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 THAP11Q96EK4 314 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 IFT43Q96FT9 208 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 HMCESQ96FZ2 354 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 KLF6Q99612 283 aaPredicted RBP9.87□□□□□ -0.83
VPS41-201ENST00000265745 BPIFA3Q9BQP9 254 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 CALN1Q9BXU9 219 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 KLC2Q9H0B6 622 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 CAAP1Q9H8G2 361 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 RAXQ9Y2V3 346 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 MFHAS1Q9Y4C4 1052 aa9.87□□□□□ -0.83
VPS41-201ENST00000265745 CACNA1GO43497 2377 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 SPTY2D1-AS1A0A0U1RR47 76 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 A6NNZ2 444 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 RASA4BC9J798 803 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 NEMP1O14524 444 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 SPINT1O43278 529 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 RASA4O43374 803 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 TMCC1O94876 653 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 ACP1P24666 158 aa9.86□□□□□ -0.83
VPS41-201ENST00000265745 TARDBPQ13148 414 aaKnown RBP eCLIP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms