RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CAAP1Q9H8G2 361 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 EFCAB1Q9HAE3 211 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 DMAP1Q9NPF5 467 aaPredicted RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 MIOSQ9NXC5 875 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 TSR3Q9UJK0 312 aaKnown RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 PDE4DIPQ5VU43 2346 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 TCAF2A6NFQ2 919 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 LRRC14BA6NHZ5 514 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 MYL4P12829 197 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PCSK6P29122 969 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 BRCC3P46736 316 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 INHBCP55103 352 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PRKAA1Q13131 559 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 SLC12A1Q13621 1099 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 ARL13BQ3SXY8 428 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 UBXN11Q5T124 520 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 KLHDC10Q6PID8 442 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PIM3Q86V86 326 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 ZFP28Q8NHY6 868 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 HIC2Q96JB3 615 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 NOL11Q9H8H0 719 aaKnown RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 COQ10BQ9H8M1 238 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 DSEQ9UL01 958 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PPP2R3BQ9Y5P8 575 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 ZNF839A8K0R7 811 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 GPC4O75487 556 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 CCDC166P0CW27 439 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 CES1P23141 567 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ARNTP27540 789 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 SCNN1GP51170 649 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 RAB10P61026 200 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 PSME3P61289 254 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 YBX1P67809 324 aaKnown RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 ADGRE1Q14246 886 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 PRPSAP1Q14558 356 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ADGRG6Q86SQ4 1221 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 IFNEQ86WN2 208 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ATPAF2Q8N5M1 289 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 KDM1BQ8NB78 822 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 RP9Q8TA86 221 aaKnown RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 NPLOC4Q8TAT6 608 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 GPR152Q8TDT2 470 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 GPR22Q99680 433 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 OLFM1Q99784 485 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 TBL1YQ9BQ87 522 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 TSPYL2Q9H2G4 693 aaPredicted RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 RHOJQ9H4E5 214 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 FAM96AQ9H5X1 160 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 VCX3AQ9NNX9 186 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 RBM22Q9NW64 420 aaKnown RBP eCLIP9.22□□□□□ -0.93
MSH4-201ENST00000263187 EGFL7Q9UHF1 273 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 AURKCQ9UQB9 309 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 KCTD3Q9Y597 815 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 TRIP12Q14669 1992 aaPredicted RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 GLTPD2A6NH11 291 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 SAC3D1A6NKF1 404 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 TMEM114B3SHH9 223 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 VILLO15195 856 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 FOXD2O60548 495 aaPredicted RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 TIPRLO75663 272 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 MT-ND1P03886 318 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 OR4Q2P0C623 313 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 MAGEA12P43365 314 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 MAP3K21Q5TCX8 1036 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ITPRIPL1Q6GPH6 555 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 OR52K2Q8NGK3 314 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 NT5C3BQ969T7 300 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 PABPC5Q96DU9 382 aaKnown RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 SLC29A1Q99808 456 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ALG9Q9H6U8 611 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ZBTB26Q9HCK0 441 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ADARB2Q9NS39 739 aaKnown RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 ZDHHC7Q9NXF8 308 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 RIMS3Q9UJD0 308 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ADAM28Q9UKQ2 775 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 C7orf72A4D263 438 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ZNF487B1APH4 448 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 PDLIM1O00151 329 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 PLOD2O00469 737 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 SDHDO14521 159 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 SUPT7LO94864 414 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 CLIC3O95833 236 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 PABPC4LP0CB38 370 aaKnown RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 CHRM3P20309 590 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 CASP2P42575 452 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 NAB1Q13506 487 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 DUSP28Q4G0W2 176 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 HABP4Q5JVS0 413 aaKnown RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 NAPEPLDQ6IQ20 393 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 FASTKD5Q7L8L6 764 aaKnown RBP9.22□□□□□ -0.93
MSH4-201ENST00000263187 STYXQ8WUJ0 223 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 ANKRD49Q8WVL7 239 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 LPGAT1Q92604 370 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 B3GALT6Q96L58 329 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 SLC2A13Q96QE2 648 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 SLC39A8Q9C0K1 460 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 TMLHEQ9NVH6 421 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 RHBDL2Q9NX52 303 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 GDAP2Q9NXN4 497 aa9.22□□□□□ -0.93
MSH4-201ENST00000263187 RCOR3Q9P2K3 495 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms