RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GALNT18Q6P9A2 607 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 TRABD2AQ86V40 505 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 GJD4Q96KN9 370 aaPredicted RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 SPATA13Q96N96 652 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 KLHL32Q96NJ5 620 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 RPRD1BQ9NQG5 326 aaKnown RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 MCUBQ9NWR8 336 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 KLHL28Q9NXS3 571 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 OR12D3Q9UGF7 316 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 LIN7AO14910 233 aaPredicted RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 GPR182O15218 404 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 SIN3BO75182 1162 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 TSPAN9O75954 239 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 AQP1P29972 269 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 NAA20P61599 178 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 TP53INP1Q96A56 240 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 VCPIP1Q96JH7 1222 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 COLEC11Q9BWP8 271 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 NFKBIZQ9BYH8 718 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 CMTM6Q9NX76 183 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 GALNT8Q9NY28 637 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 TRPM5Q9NZQ8 1165 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 NCANO14594 1321 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 RECQL5O94762 991 aaPredicted RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 SLC20A2Q08357 652 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 PUDPQ08623 228 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 C1orf186Q6ZWK4 172 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 IRF2BP2Q7Z5L9 587 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 LRRC49Q8IUZ0 686 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 HERC6Q8IVU3 1022 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 ACE2Q9BYF1 805 aaPredicted RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 EPB41L4BQ9H329 900 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 TRHDEQ9UKU6 1024 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 SLC12A4Q9UP95 1085 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 SPACA6W5XKT8 324 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 hCG_1818297A0A087WSY0 165 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 FAM25EA8MYX2 175 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 MAPKAPK3Q16644 382 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 CNSTQ6PJW8 725 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 DEFB128Q7Z7B8 93 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 TCF12Q99081 682 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 MARCH7Q9H992 704 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 TLR8Q9NR97 1041 aaKnown RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 PTGFRNQ9P2B2 879 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 HBS1LQ9Y450 684 aaKnown RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 POLR3HQ9Y535 204 aaPredicted RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 ASTN2O75129 1339 aaPredicted RBP12.16□□□□□ -0.46
SMG6-201ENST00000263073 PTPRMP28827 1452 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 FER1L4A9Z1Z3 1794 aa12.16□□□□□ -0.46
SMG6-201ENST00000263073 G3V2T6 193 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CLDN5O00501 218 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CD3EAPO15446 510 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 IL2P60568 153 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 DDR1Q08345 913 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 TAB1Q15750 504 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 MZT2BQ6NZ67 158 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CYP20A1Q6UW02 462 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 KRT74Q7RTS7 529 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 FAM9CQ8IZT9 166 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 UCMAQ8WVF2 138 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 TBCBQ99426 244 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 DENND2DQ9H6A0 471 aaPredicted RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 SALL4Q9UJQ4 1053 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 WASF2Q9Y6W5 498 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 KHDRBS3O75525 346 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 ITGA3P26006 1051 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 PRKAA2P54646 552 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 POU5F1Q01860 360 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 LPIN1Q14693 890 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 KHDC1Q4VXA5 237 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 RALGPS1Q5JS13 557 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 RAP1GAP2Q684P5 730 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 SDE2Q6IQ49 451 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CLNKQ7Z7G1 428 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 PDCD10Q9BUL8 212 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 POPDC2Q9HBU9 364 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CASZ1Q86V15 1759 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 SIGLEC16A6NMB1 481 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 TOR1BO14657 336 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CYP1A1P04798 512 aaPredicted RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 EIF4BP23588 611 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 HPCAL1P37235 193 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CDC42P60953 191 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 ARHGAP15Q53QZ3 475 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 OGFOD2Q6N063 350 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 ZCCHC8Q6NZY4 707 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 MAP4K3Q8IVH8 894 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 RP9Q8TA86 221 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 PCDHB18PQ96TA0 734 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CCDC3Q9BQI4 270 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 OSBPL11Q9BXB4 747 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 ALG2Q9H553 416 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 SAMHD1Q9Y3Z3 626 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 DLC1Q96QB1 1528 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 H3BRB1 525 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms