RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 FDFT1P37268 417 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 ADCY8P40145 1251 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 AP1S1P61966 158 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 BASP1P80723 227 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 SEMA5AQ13591 1074 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 GAS6Q14393 721 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 GLE1Q53GS7 698 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 SDE2Q6IQ49 451 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 KIAA1211LQ6NV74 962 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 TRIM67Q6ZTA4 783 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 MTERF4Q7Z6M4 381 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 KLHDC8BQ8IXV7 354 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 STK40Q8N2I9 435 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 OSBPL6Q9BZF3 934 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 ZDHHC6Q9H6R6 413 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 POLR3BQ9NW08 1133 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 WASF2Q9Y6W5 498 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 TECTAO75443 2155 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 A0A1W2PQF6 199 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 HEXIM1O94992 359 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 PIGNO95427 931 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 POP4O95707 220 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 SERPINF2P08697 491 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 RHOXF2BP0C7M4 288 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 COL9A1P20849 921 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 CES1P23141 567 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 CAMK2GQ13555 558 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 ELAVL3Q14576 367 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 HSF5Q4G112 596 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 RALGPS1Q5JS13 557 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 DUPD1Q68J44 220 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 FLCNQ8NFG4 579 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 FAM129BQ96TA1 746 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 HEPHQ9BQS7 1158 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 RHOXF2Q9BQY4 288 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 DPH5Q9H2P9 285 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 CD248Q9HCU0 757 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 FAM153AQ9UHL3 310 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 MMP17Q9ULZ9 603 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 UTP11Q9Y3A2 253 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 PCDHGC4Q9Y5F7 938 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 CKAP5Q14008 2032 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 SYNCRIPO60506 623 aaKnown RBP15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 PMPCBO75439 489 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 ANXA9O76027 345 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 MAPK8P45983 427 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 RPL21P46778 160 aaKnown RBP15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 TRAF2Q12933 501 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 PRPSAP1Q14558 356 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 TRADDQ15628 312 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 EOGTQ5NDL2 527 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 KCTD11Q693B1 232 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 CWF19L1Q69YN2 538 aaKnown RBP15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 KDELC1Q6UW63 502 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 CAMK1DQ8IU85 385 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 PDCD7Q8N8D1 485 aaKnown RBP15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 GRIN3AQ8TCU5 1115 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 OR8D1Q8WZ84 308 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 CPT1BQ92523 772 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 CLDN23Q96B33 292 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 LRRC45Q96CN5 670 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 CPEB1Q9BZB8 566 aaKnown RBP15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 RAB17Q9H0T7 212 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 MFSD1Q9H3U5 465 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 VPS45Q9NRW7 570 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 IL36AQ9UHA7 158 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 SNX24Q9Y343 169 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 SIT1Q9Y3P8 196 aa15.98■□□□□ 0.15
CCDC90B-201ENST00000260054 TCRBV7S3A2A0A539 114 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 ESYT3A0FGR9 886 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 CHURC1-FNTBB4DL54 471 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 BHMG1C9JSJ3 638 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 TRAFD1O14545 582 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 DNALI1O14645 258 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 LEFTY1O75610 366 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 APRTP07741 180 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 GEMP55040 296 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 GUCY2DQ02846 1103 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 MPP3Q13368 585 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 OLIG2Q13516 323 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 KCNJ11Q14654 390 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 SLC14A2Q15849 920 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 PCSK7Q16549 785 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 ARSIQ5FYB1 569 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 RNASEH2BQ5TBB1 312 aaKnown RBP15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 ANKRD22Q5VYY1 191 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 TMEM92Q6UXU6 159 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 MRGPRX2Q96LB1 330 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 TUBGCP5Q96RT8 1024 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 TDRD1Q9BXT4 1180 aaKnown RBP15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 C2orf42Q9NWW7 574 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 SARDHQ9UL12 918 aa15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 AAR2Q9Y312 384 aaKnown RBP15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 FARP1Q9Y4F1 1045 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-201ENST00000260054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-201ENST00000260054 DYNC1I1O14576 645 aa15.96■□□□□ 0.15
CCDC90B-201ENST00000260054 ALOX15BO15296 676 aa15.96■□□□□ 0.15
CCDC90B-201ENST00000260054 TP73O15350 636 aa15.96■□□□□ 0.15
CCDC90B-201ENST00000260054 SEC31AO94979 1220 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms