RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 RABGEF1Q9UJ41 708 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 GSAPA4D1B5 854 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ALADP13716 330 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ALOX12P18054 663 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ARMC4Q5T2S8 1044 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ZBTB46Q86UZ6 589 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 CHPFQ8IZ52 775 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 CACTIN-AS1Q8N1I8 211 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 CXorf40BQ96DE9 158 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ATP13A3Q9H7F0 1226 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 RAB21Q9UL25 225 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 GABRR2P28476 465 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 HOXA10P31260 410 aaPredicted RBP18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 CYP4F2P78329 520 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 CYP4F3Q08477 520 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 USP41Q3LFD5 358 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 CMC1Q7Z7K0 106 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 DAPK2Q9UIK4 370 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 MYL12BO14950 172 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 ADCY6O43306 1168 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 CXCL14O95715 111 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 BCL10O95999 233 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 SLC44A4Q53GD3 710 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 ZNF605Q86T29 641 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 SLC25A23Q9BV35 468 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 TOR4AQ9NXH8 423 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 TRBV23OR9-2A0A075B6M9 112 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 ERAL1O75616 437 aaKnown RBP18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 EPHA3P29320 983 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 FLT3LGP49771 235 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 CDH13P55290 713 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 CLYBLQ8N0X4 340 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 TMEM199Q8N511 208 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 FAM105AQ9NUU6 356 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 PREX1Q8TCU6 1659 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 VWDEQ8N2E2 1590 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 TK2O00142 265 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 SCAMP1O15126 338 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 TLL1O43897 1013 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 OR6B1O95007 311 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 MYL12AP19105 171 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 MSX2P35548 267 aaPredicted RBP18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 AUHQ13825 339 aaKnown RBP18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 FLCNQ8NFG4 579 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 ACTRT2Q8TDY3 377 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 OLFM1Q99784 485 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 MRPL39Q9NYK5 338 aaKnown RBP18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 A0A1W2PQH9 124 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 ISM1B1AKI9 464 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 BMP10O95393 424 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 PTSQ03393 145 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 BIKQ13323 160 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 PDZK1Q5T2W1 519 aa18.84■□□□□ 0.61
SMARCC1-201ENST00000254480 NTSP30990 170 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 PIK3CGP48736 1102 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 CERCAMQ5T4B2 595 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 STK40Q8N2I9 435 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 RORBQ92753 470 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 FCRL2Q96LA5 508 aaPredicted RBP18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 FERD3LQ96RJ6 166 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 KIF20BQ96Q89 1820 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 CNTNAP1P78357 1384 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 A0A1W2PPM1 405 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 TSPAN19P0C672 248 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 CDK7P50613 346 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 LSM3P62310 102 aaKnown RBP18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 PAGE2BQ5JRK9 111 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 FKBP1CQ5VVH2 108 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 ALYREFQ86V81 257 aaKnown RBP18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 DHRSXQ8N5I4 330 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 FAM45AQ8TCE6 357 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 C1QTNF7Q9BXJ2 289 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 REEP1Q9H902 201 aa18.83■□□□□ 0.61
SMARCC1-201ENST00000254480 hCG_1818297A0A087WSY0 165 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 KCTD21Q4G0X4 260 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 FBXO48Q5FWF7 155 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 IPCEF1Q8WWN9 437 aaPredicted RBP18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 MRPS5P82675 430 aaKnown RBP18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 NRG1Q02297 640 aaPredicted RBP18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 C16orf72Q14CZ0 275 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 ARSHQ5FYA8 562 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 SAMD4BQ5PRF9 694 aaKnown RBP18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 FAM35AQ86V20 835 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 BPIFB6Q8NFQ5 453 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 APOL4Q9BPW4 351 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 CYP3A7-CYP3A51PA0A087WV96 503 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 SLC15A5A6NIM6 579 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 CYP3A7P24462 503 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 FKBP1AP62942 108 aaKnown RBP18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 ZNF618Q5T7W0 954 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 UBASH3BQ8TF42 649 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 SLCO1B3Q9NPD5 702 aa18.83■□□□□ 0.6
SMARCC1-201ENST00000254480 KLRG2A4D1S0 409 aaPredicted RBP18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 RAB14P61106 215 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 C10orf107Q8IVU9 208 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 HSFY1Q96LI6 401 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 MSRAQ9UJ68 235 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 AGO1Q9UL18 857 aaKnown RBP18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 TGFB1I1O43294 461 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms