RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FAM46CQ5VWP2 391 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 ITPRIPL1Q6GPH6 555 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 C4orf22Q6V702 233 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 NELL1Q92832 810 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 MAGOHBQ96A72 148 aaKnown RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 ECHDC3Q96DC8 303 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 EXOC2Q96KP1 924 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 NSMCE3Q96MG7 304 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 ZNF641Q96N77 438 aaPredicted RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 RUNDC3BQ96NL0 473 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 PPP1R2P1Q96PQ5 205 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 FCRL5Q96RD9 977 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 NOD2Q9HC29 1040 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 SPATA6Q9NWH7 488 aaPredicted RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 SEPT10Q9P0V9 454 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 KLHL8Q9P2G9 620 aaPredicted RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 DKK3Q9UBP4 350 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 PCYOX1Q9UHG3 505 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 FEZ2Q9UHY8 353 aaPredicted RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 EVLQ9UI08 416 aaPredicted RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 SARDHQ9UL12 918 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 ATG2BQ96BY7 2078 aa14.27□□□□□ -0.12
VPS25-201ENST00000253794 A0A1W2PQ67 120 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 C1QTNF3-AMACRE9PGA6 284 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 HTRA2O43464 458 aaPredicted RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 LAMTOR5O43504 91 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 LEFTY1O75610 366 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 NEBLO76041 1014 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 URI1O94763 535 aaPredicted RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 C5AR1P21730 350 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 ITGB7P26010 798 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 SCNN1BP51168 640 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 MAXP61244 160 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 SKOR1P84550 965 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 CKAP4Q07065 602 aaKnown RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 SFSWAPQ12872 951 aaKnown RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 SNX1Q13596 522 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 IHHQ14623 411 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 ZNF528Q3MIS6 628 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 CCDC137Q6PK04 289 aaKnown RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 GDPD4Q6W3E5 623 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 USP30Q70CQ3 517 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 PRPF39Q86UA1 669 aaKnown RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 SPATA4Q8NEY3 305 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 MDGA1Q8NFP4 955 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 PIP4K2CQ8TBX8 421 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 GRK7Q8WTQ7 553 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 ZNF592Q92610 1267 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 SIPA1Q96FS4 1042 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 AGAP3Q96P47 875 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 HHIPQ96QV1 700 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 SEMA3CQ99985 751 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 FAM126AQ9BYI3 521 aaPredicted RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 CEP41Q9BYV8 373 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 PABPC3Q9H361 631 aaKnown RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 ZDHHC6Q9H6R6 413 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 ATP13A3Q9H7F0 1226 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 VPS45Q9NRW7 570 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 USP36Q9P275 1121 aaKnown RBP14.27□□□□□ -0.13
VPS25-201ENST00000253794 NEU2Q9Y3R4 380 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 ZNF318Q5VUA4 2279 aa14.27□□□□□ -0.13
VPS25-201ENST00000253794 FZD6O60353 706 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 GJB3O75712 270 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 SERPINF2P08697 491 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 NFKB1P19838 968 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 SERPINA4P29622 427 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 DRD3P35462 400 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 KCNJ1P48048 391 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 NRLP54845 237 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 DSC2Q02487 901 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 BCL2L1Q07817 233 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 PARP6Q2NL67 630 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 ZNF805Q5CZA5 627 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 ARSIQ5FYB1 569 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 PID1Q7Z2X4 250 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 MMAAQ8IVH4 418 aaKnown RBP14.26□□□□□ -0.13
VPS25-201ENST00000253794 OR6K2Q8NGY2 324 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 CCDC110Q8TBZ0 833 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 PRCCQ92733 491 aaPredicted RBP14.26□□□□□ -0.13
VPS25-201ENST00000253794 PPP1R16AQ96I34 528 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 GORASP1Q9BQQ3 440 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 HDAC8Q9BY41 377 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 SUV39H2Q9H5I1 410 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 PCDH9Q9HC56 1237 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 ITM2CQ9NQX7 267 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 PAK5Q9P286 719 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 FZD4Q9ULV1 537 aa14.26□□□□□ -0.13
VPS25-201ENST00000253794 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 C10orf142B7Z368 130 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 GALR2O43603 387 aaPredicted RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 BNIP3LO60238 219 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 IL1BP01584 269 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 DNTTP04053 509 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 GKP32189 559 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 SLC8A1P32418 973 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 PSMD8P48556 350 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 SUOXP51687 545 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 RPL26P61254 145 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms