RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 RHOXF2BP0C7M4 288 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 HSPA9P38646 679 aaKnown RBP20.38■□□□□ 0.85
SNRPA-201ENST00000243563 RPL21P46778 160 aaKnown RBP20.38■□□□□ 0.85
SNRPA-201ENST00000243563 SNRPD1P62314 119 aaKnown RBP20.38■□□□□ 0.85
SNRPA-201ENST00000243563 TRAF2Q12933 501 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 SPARCL1Q14515 664 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 METTL3Q86U44 580 aaKnown RBP20.38■□□□□ 0.85
SNRPA-201ENST00000243563 FLCNQ8NFG4 579 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 GRIN3AQ8TCU5 1115 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 KCNV2Q8TDN2 545 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 RHOXF2Q9BQY4 288 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 DPH5Q9H2P9 285 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 FEZ2Q9UHY8 353 aaPredicted RBP20.38■□□□□ 0.85
SNRPA-201ENST00000243563 PCDHGC4Q9Y5F7 938 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 FAM187AA6NFU0 413 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 STK25O00506 426 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 HOXB2P14652 356 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 CSNK1DP48730 415 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 CAMK2GQ13555 558 aaPredicted RBP20.38■□□□□ 0.85
SNRPA-201ENST00000243563 PARP6Q2NL67 630 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 DUPD1Q68J44 220 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 ITPRIPL1Q6GPH6 555 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 ZSWIM9Q86XI8 627 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 CACUL1Q86Y37 369 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 CAMK1DQ8IU85 385 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 KLHDC8BQ8IXV7 354 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 CPT1BQ92523 772 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 MMP17Q9ULZ9 603 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 SNX24Q9Y343 169 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 PMPCBO75439 489 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 HEXIM1O94992 359 aaKnown RBP20.37■□□□□ 0.85
SNRPA-201ENST00000243563 COPAP53621 1224 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 BASP1P80723 227 aaKnown RBP20.37■□□□□ 0.85
SNRPA-201ENST00000243563 SEMA5AQ13591 1074 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 LRRC32Q14392 662 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 PCSK7Q16549 785 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 POM121L1PQ3SYA9 428 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 KCTD11Q693B1 232 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 SYDE1Q6ZW31 735 aaPredicted RBP20.37■□□□□ 0.85
SNRPA-201ENST00000243563 KDELC2Q7Z4H8 507 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 MAATS1Q7Z4T9 603 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 PLPP6Q8IY26 295 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 PDCD7Q8N8D1 485 aaKnown RBP20.37■□□□□ 0.85
SNRPA-201ENST00000243563 CLDN23Q96B33 292 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 MRGPRX2Q96LB1 330 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 SMIM14Q96QK8 99 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 ERP44Q9BS26 406 aa20.37■□□□□ 0.85
SNRPA-201ENST00000243563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.36■□□□□ 0.85
SNRPA-201ENST00000243563 NPC1O15118 1278 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 USP12O75317 370 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 LEFTY1O75610 366 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 ZNF189O75820 626 aaPredicted RBP20.36■□□□□ 0.85
SNRPA-201ENST00000243563 TMEM63AO94886 807 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 ADCY8P40145 1251 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 GRIA1P42261 906 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 AP1S1P61966 158 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 KCNJ11Q14654 390 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 NAA30Q147X3 362 aaPredicted RBP20.36■□□□□ 0.85
SNRPA-201ENST00000243563 ARSIQ5FYB1 569 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 APOL2Q9BQE5 337 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 HEPHQ9BQS7 1158 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 GRHL1Q9NZI5 618 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 SUN2Q9UH99 717 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 SLC8A2Q9UPR5 921 aa20.36■□□□□ 0.85
SNRPA-201ENST00000243563 TARSL2A2RTX5 802 aaKnown RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 EFCAB8A8MWE9 144 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 CHURC1-FNTBB4DL54 471 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 PLK4O00444 970 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 TRAFD1O14545 582 aaPredicted RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 PRLP01236 227 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 PDHA1P08559 390 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 ACTN2P35609 894 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 PTPRRQ15256 657 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 RNASEH2BQ5TBB1 312 aaKnown RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 IPMKQ8NFU5 416 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 TRIB3Q96RU7 358 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 NELL2Q99435 816 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 MKRN2Q9H000 416 aaKnown RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 DLGAP2Q9P1A6 1054 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 IL36AQ9UHA7 158 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 SIT1Q9Y3P8 196 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 FARP1Q9Y4F1 1045 aaPredicted RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 TTC28Q96AY4 2481 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 TMEM221A6NGB7 291 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 M0R296 226 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 DNALI1O14645 258 aaPredicted RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 POP4O95707 220 aaKnown RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 AGTP01019 485 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 UGT2B4P06133 528 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 ADRA1AP35348 466 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 FDFT1P37268 417 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 CHRNA4P43681 627 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 RECQLP46063 649 aaPredicted RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 WNT3AP56704 352 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 GUCY2DQ02846 1103 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 ELAVL3Q14576 367 aaKnown RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 IZUMO3Q5VZ72 239 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 MMAAQ8IVH4 418 aaKnown RBP20.35■□□□□ 0.85
SNRPA-201ENST00000243563 SYNPOQ8N3V7 929 aa20.35■□□□□ 0.85
SNRPA-201ENST00000243563 TDRD1Q9BXT4 1180 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms