RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CALML6Q8TD86 181 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 CNDP1Q96KN2 507 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 SPATA17Q96L03 361 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 GPAMQ9HCL2 828 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 VTI1BQ9UEU0 232 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 J3KR12 359 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 CCNT2O60583 730 aaKnown RBP16.34■□□□□ 0.21
UBE3D-201ENST00000237186 MMP2P08253 660 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 HAPLN1P10915 354 aaPredicted RBP16.34■□□□□ 0.21
UBE3D-201ENST00000237186 ACADSP16219 412 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 ATP6V1C1P21283 382 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 CHRNA4P43681 627 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 LEPRP48357 1165 aaKnown RBP16.34■□□□□ 0.21
UBE3D-201ENST00000237186 APLP1P51693 650 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 TAS2R39P59534 338 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 RING1Q06587 406 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 SLC10A7Q0GE19 358 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 ASPHQ12797 758 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 EFEMP1Q12805 493 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 CCDC6Q16204 474 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 TSTD2Q5T7W7 516 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 SNX30Q5VWJ9 437 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 ZNF280DQ6N043 979 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 FBXL22Q6P050 247 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 FAM43BQ6ZT52 329 aaPredicted RBP16.34■□□□□ 0.21
UBE3D-201ENST00000237186 ATAD1Q8NBU5 361 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
UBE3D-201ENST00000237186 MAPK15Q8TD08 544 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 PANX3Q96QZ0 392 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 MRPL57Q9BQC6 102 aaKnown RBP16.34■□□□□ 0.21
UBE3D-201ENST00000237186 ATXN3LQ9H3M9 355 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 TCF7L2Q9NQB0 619 aa16.34■□□□□ 0.21
UBE3D-201ENST00000237186 SLC22A2O15244 555 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 DLX3O60479 287 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 CNTN5O94779 1100 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 LUC7L3O95232 432 aaKnown RBP16.33■□□□□ 0.21
UBE3D-201ENST00000237186 TFEBP19484 476 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 NCF2P19878 526 aaPredicted RBP16.33■□□□□ 0.21
UBE3D-201ENST00000237186 SAT1P21673 171 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 FGFR3P22607 806 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 SERPINB5P36952 375 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 KPNA2P52292 529 aaKnown RBP16.33■□□□□ 0.21
UBE3D-201ENST00000237186 DNAJB13P59910 316 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 MXRA7P84157 204 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 IL10RBQ08334 325 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 GPR17Q13304 367 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 BTG3Q14201 252 aaPredicted RBP16.33■□□□□ 0.21
UBE3D-201ENST00000237186 SLC14A2Q15849 920 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 ARL13AQ5H913 290 aaPredicted RBP16.33■□□□□ 0.21
UBE3D-201ENST00000237186 FAM171A1Q5VUB5 890 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 ZNF470Q6ECI4 717 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 RIPOR1Q6ZS17 1223 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 RAET1EQ8TD07 263 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 ACTRT2Q8TDY3 377 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 FBXO32Q969P5 355 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 MRPL46Q9H2W6 279 aaKnown RBP16.33■□□□□ 0.21
UBE3D-201ENST00000237186 NT5MQ9NPB1 228 aa16.33■□□□□ 0.21
UBE3D-201ENST00000237186 TLR8Q9NR97 1041 aaKnown RBP16.33■□□□□ 0.21
UBE3D-201ENST00000237186 THSD7BQ9C0I4 1608 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 LOC285095A0A1B0GVY8 99 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 MROH6A6NGR9 719 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 LIN7AO14910 233 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-201ENST00000237186 TBC1D4O60343 1298 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 NPHS1O60500 1241 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 TBX18O95935 607 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 CHRNGP07510 517 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 ADSLP30566 484 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-201ENST00000237186 AVPR1AP37288 418 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 CLNS1AP54105 237 aaKnown RBP16.33■□□□□ 0.2
UBE3D-201ENST00000237186 NAGLUP54802 743 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 YBEYP58557 167 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-201ENST00000237186 SLC25A3Q00325 362 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 ILF2Q12905 390 aaKnown RBP16.33■□□□□ 0.2
UBE3D-201ENST00000237186 DLG1Q12959 904 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 KLF10Q13118 480 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 PSMD5Q16401 504 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 PARP15Q460N3 678 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 TMCO4Q5TGY1 634 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 TFAP2DQ7Z6R9 452 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 LMNTD2Q8IXW0 634 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 LSMEM2Q8N112 164 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 SPPL2BQ8TCT7 592 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 NRG4Q8WWG1 115 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 DNAJC9Q8WXX5 260 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 IGSF8Q969P0 613 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 NXNL1Q96CM4 212 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 ZNF333Q96JL9 665 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 CLPTM1LQ96KA5 538 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 SCYL1Q96KG9 808 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 MYCBPQ99417 103 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-201ENST00000237186 OMDQ99983 421 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 MARCH2Q9P0N8 246 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 XPR1Q9UBH6 696 aa16.33■□□□□ 0.2
UBE3D-201ENST00000237186 NVLO15381 856 aaKnown RBP16.32■□□□□ 0.2
UBE3D-201ENST00000237186 SLC7A4O43246 635 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 GRID2O43424 1007 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 ZBTB14O43829 449 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 PIGNO95427 931 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 ZDHHC11BP0C7U3 371 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 COX4I1P13073 169 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms