RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 NMRAL1Q9HBL8 299 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 TCF7L2Q9NQB0 619 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 IARS2Q9NSE4 1012 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 DAPK2Q9UIK4 370 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 CDC14AQ9UNH5 594 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 TMED5Q9Y3A6 229 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 FADS3Q9Y5Q0 445 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 NRP1O14786 923 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 TRIM13O60858 407 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 TOMM70O94826 608 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SBK3P0C264 359 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 ERCC2P18074 760 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 EEF1B2P24534 225 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SPRP35270 261 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 GARSP41250 739 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 RPL34P49207 117 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 BCAP31P51572 246 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 NKX2-5P52952 324 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SNX16P57768 344 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 LAMC2Q13753 1193 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 TGFBIQ15582 683 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 NEDD8Q15843 81 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 LSM12Q3MHD2 195 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 CCDC153Q494R4 210 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SPANXN3Q5MJ09 141 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 CLEC14AQ86T13 490 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 TMEM135Q86UB9 458 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 BEST2Q8NFU1 509 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 RSPH1Q8WYR4 309 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 MLPHQ9BV36 600 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 MRPL46Q9H2W6 279 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 LRRC40Q9H9A6 602 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 IGSF9Q9P2J2 1179 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC39A10Q9ULF5 831 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 CDY2AQ9Y6F7 541 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 CDY1Q9Y6F8 540 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 DCLK1O15075 740 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 FYNP06241 537 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 MYL4P12829 197 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 XRCC1P18887 633 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 UGT1A6P19224 532 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 UGT1A1P22309 533 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 UGT1A4P22310 534 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 TCEA1P23193 301 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 GLDCP23378 1020 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 PIK3R1P27986 724 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 NMBRP28336 390 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 UGT1A3P35503 534 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 UGT1A5P35504 534 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 THOP1P52888 689 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 NUP107P57740 925 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 CDKL1Q00532 357 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 DPYSQ14117 519 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF460Q14592 562 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 KYAT1Q16773 422 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 PSTKQ8IV42 348 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 TMEM151AQ8N4L1 468 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 CDRT15Q96T59 188 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 NPY6RQ99463 290 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 NAT9Q9BTE0 207 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SNX25Q9H3E2 840 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 C20orf96Q9NUD7 363 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 ADA2Q9NZK5 511 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZDHHC2Q9UIJ5 367 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 TBC1D30Q9Y2I9 924 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SMIM28A0A1B0GU29 152 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 FBXO21O94952 628 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 ARSAP15289 507 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 HMOX2P30519 316 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 DPP6P42658 865 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 MS4A2Q01362 244 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 GRM3Q14832 879 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 PRR23BQ6ZRT6 265 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 PAQR9Q6ZVX9 377 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SNX29P2Q8IUI4 249 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 LRRC52Q8N7C0 313 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 Q8N9G6 341 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SREK1Q8WXA9 508 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 JADE3Q92613 823 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 VPS39Q96JC1 886 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 VPS50Q96JG6 964 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 PCDH12Q9NPG4 1184 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 GID8Q9NWU2 228 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 MOSPD1Q9UJG1 213 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 FIS1Q9Y3D6 152 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 SNX13Q9Y5W8 968 aa9.51□□□□□ -0.89
HLA-DOA-201ENST00000229829 PIRO00625 290 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 PIGNO95427 931 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 AP2A1O95782 977 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 MAP4P27816 1152 aaKnown RBP9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 NAGLUP54802 743 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 NAB1Q13506 487 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 PAFAH1B3Q15102 231 aaKnown RBP9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 ARL13AQ5H913 290 aaPredicted RBP9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC27A1Q6PCB7 646 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 ALKAL1Q6UXT8 129 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 KCNMB4Q86W47 210 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 CROCCP3Q8IVE0 287 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 DSELQ8IZU8 1212 aa9.5□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC7A14Q8TBB6 771 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms