RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 TEX44Q53QW1 395 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 OGFRL1Q5TC84 451 aaPredicted RBP11.65□□□□□ -0.54
CCND1-201ENST00000227507 PID1Q7Z2X4 250 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 SLC43A3Q8NBI5 491 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 APBB2Q92870 758 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 COX4I2Q96KJ9 171 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 PTPN18Q99952 460 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 RTKNQ9BST9 563 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 CCDC68Q9H2F9 335 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 ADNPQ9H2P0 1102 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 POPDC2Q9HBU9 364 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCND1-201ENST00000227507 COPG2Q9UBF2 871 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 TSPAN16Q9UKR8 245 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 CDC14AQ9UNH5 594 aa11.65□□□□□ -0.54
CCND1-201ENST00000227507 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.55
CCND1-201ENST00000227507 A0A1W2PPW3 197 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 E7ESA3 106 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TSPAN1O60635 241 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 CBFA2T3O75081 653 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 RXRGP48443 463 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TLE2Q04725 743 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 PITRM1Q5JRX3 1037 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 CHST15Q7LFX5 561 aaPredicted RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 CPNE9Q8IYJ1 553 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 FIBCD1Q8N539 461 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 UBR7Q8N806 425 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 PSAT1Q9Y617 370 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 A0A096LPK6 155 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 GMNNO75496 209 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 FBXO21O94952 628 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 H6PDO95479 791 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 METTL18O95568 372 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 PORP16435 677 aaPredicted RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 CDH3P22223 829 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 MAP3K7CLP57077 242 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 GSTM4Q03013 218 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TUSC3Q13454 348 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 GRM2Q14416 872 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 MBLAC2Q68D91 279 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 SLC2A7Q6PXP3 512 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 PXYLP1Q8TE99 480 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 GPATCH1Q9BRR8 931 aaKnown RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 ING2Q9H160 280 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 DDIT4Q9NX09 232 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TRPM5Q9NZQ8 1165 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TIMM44O43615 452 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TRIM13O60858 407 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 CNMDO75829 334 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 FGF3P11487 239 aaPredicted RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 CD1EP15812 388 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 KPNA1P52294 538 aaPredicted RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 EPHB3P54753 998 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 GNA12Q03113 381 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 MBTD1Q05BQ5 628 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 RPS6KA2Q15349 733 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TAPT1Q6NXT6 567 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 NUDT18Q6ZVK8 323 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 OFCC1Q8IZS5 231 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 SLC7A5P1Q8MH63 180 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 LRRC52Q8N7C0 313 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 CCDC138Q96M89 665 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 CCDC90BQ9GZT6 254 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 SP110Q9HB58 689 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 MAST2Q6P0Q8 1798 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 PHGDHO43175 533 aaKnown RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 AGKQ53H12 422 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 KCNT2Q6UVM3 1135 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 UNC93AQ86WB7 457 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 ZNF778Q96MU6 729 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 CYP4F12Q9HCS2 524 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 AASDHPPTQ9NRN7 309 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 TUBA8Q9NY65 449 aaPredicted RBP11.64□□□□□ -0.55
CCND1-201ENST00000227507 DAPK2Q9UIK4 370 aa11.64□□□□□ -0.55
CCND1-201ENST00000227507 LAMB2P55268 1798 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 VAPBO95292 243 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 TRUB2O95900 331 aaKnown RBP11.63□□□□□ -0.55
CCND1-201ENST00000227507 HARS2P49590 506 aaKnown RBP11.63□□□□□ -0.55
CCND1-201ENST00000227507 MAPK11Q15759 364 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 KIF19Q2TAC6 998 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 LSM12Q3MHD2 195 aaKnown RBP11.63□□□□□ -0.55
CCND1-201ENST00000227507 CDKL3Q8IVW4 592 aaPredicted RBP11.63□□□□□ -0.55
CCND1-201ENST00000227507 EXT2Q93063 718 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 C12orf43Q96C57 262 aaKnown RBP11.63□□□□□ -0.55
CCND1-201ENST00000227507 OMDQ99983 421 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 ELOVL4Q9GZR5 314 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 UNC93B1Q9H1C4 597 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 PDZD7Q9H5P4 517 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 CXorf21Q9HAI6 301 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 CLK4Q9HAZ1 481 aaKnown RBP11.63□□□□□ -0.55
CCND1-201ENST00000227507 DERAQ9Y315 318 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 CEPT1Q9Y6K0 416 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 H3BNX3 289 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 STK25O00506 426 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 DENRO43583 198 aaKnown RBP11.63□□□□□ -0.55
CCND1-201ENST00000227507 CKMP06732 381 aa11.63□□□□□ -0.55
CCND1-201ENST00000227507 SLC2A3P11169 496 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms